LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele37g0261	ATGGACGCGCGAACAAATCATACCCCTCGCACTGTTGAAGAGGTTTTCAGGGATTTAAAGGGCCGAAGAGCTGGAATGATTAAAGCACTTACAACGGGTGCAGCATTGGTTATGACCAGTGAAAGGCTCAATTTGGCATTGGTACTATCTGATTGGCAGTTTGTTAGTATACTGTACAGTCAAGCTGTACCCTCTCTTGTAAGATGGACAGAGTTAACTTTAGGTATAACCCAAAAGTCCTCATTTGCAGCTGGAATTATCTACATTGGTGTGGATTACAATTCTCGGTTGATTAGAAAATTGGTTTCTGTTGTATGGATCAGGATATTTGCTTTTCTCTCGCTTTACTTGGTTGCAAAAACTTTCTTGCTGATTATTTCTTTTGGTTATGCTGTTGCAGATGTTGAAGATTTTTACAACCAATGTGACCCTGAGAAGGAGAATTTGTGCTTGTATGGACTTCCTAGTGAGCAGTGGGAAGTGAACTTACCTGCTGAAGAAGTTCCTCCTGAGCTTCCTGAGCCTGTTCTGGGAATTAATTTTGCCAGGGATGGCATGCAAGAAAAAGACTGGCTATCTTTAGTTGCAGTCCATAGTGATACATGGTTACTTTCTGTGGCCTTCTATTTTGGAGCCAGATTTGGGTTTGATAGAGCTGACAGGAAACGACTTTTCAATATGATCAATGAACTGCCAACAATTTTTGAAGTTGTTACTGGCACAGCAAAGAAAGAAGTCAAGGAGAAGTCTTCAACTCATAGTGGCAGCAAATCTAAGTCAGGCTCTAAGGCGAGAGCTTCAGAAATTCAGGGTAGACAATCGAAGGTGTTTCAACCAAAAGATGAGGATGAAGTTCCAGAAGAGCAAGATGAAGATGATGAACATGGGGATACCTTTTGCGGCGCATGCGGTGAGAATTACGGTACTGATGAGTTCTGGATTTGCTGTGACATCTGTGAGAAGTGGTTCCATGGCAAATGTGTGAAGATTACCCCTGCAAGGGCAGAGCATATCAAGCAATACAAATGCCCATCATGCAGTAACAAGAGAGTTCGATGCTGA	1062	0.4228	MDARTNHTPRTVEEVFRDLKGRRAGMIKALTTGAALVMTSERLNLALVLSDWQFVSILYSQAVPSLVRWTELTLGITQKSSFAAGIIYIGVDYNSRLIRKLVSVVWIRIFAFLSLYLVAKTFLLIISFGYAVADVEDFYNQCDPEKENLCLYGLPSEQWEVNLPAEEVPPELPEPVLGINFARDGMQEKDWLSLVAVHSDTWLLSVAFYFGARFGFDRADRKRLFNMINELPTIFEVVTGTAKKEVKEKSSTHSGSKSKSGSKARASEIQGRQSKVFQPKDEDEVPEEQDEDDEHGDTFCGACGENYGTDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRVRC	353

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lele37g0261	353	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	289	348	IPR013083	-
Lele37g0261	353	SMART	PHD_3	299	347	IPR001965	-
Lele37g0261	353	CDD	PHD_AL_plant	299	349	IPR044104	-
Lele37g0261	353	Pfam	PHD-finger	299	349	IPR019787	-
Lele37g0261	353	MobiDBLite	consensus disorder prediction	246	295	-	-
Lele37g0261	353	MobiDBLite	consensus disorder prediction	255	274	-	-
Lele37g0261	353	ProSiteProfiles	Zinc finger PHD-type profile.	297	349	IPR019787	-
Lele37g0261	353	Pfam	Alfin	133	240	IPR021998	GO:0006355\|GO:0042393
Lele37g0261	353	PANTHER	CPG BINDING PROTEIN	8	352	IPR045104	GO:0006355\|GO:0042393
Lele37g0261	353	FunFam	PHD finger alfin-like protein	292	348	-	-

Showing 1 to 10 of 12 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele37g0261	Lele-ChrLele37	2068189	2072223	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele37g0261	132	352	Alfin-like Transcription Factor Family	AT3G42790	72.851	5.02e-105	306

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	Alfin-like	Lele37g0261		Alfin	7.2e-57	No_clan

Showing 1 to 1 of 1 entries

Show entries

Search:

Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Lele37g0261	37	2068189	2072223	Lele38g0257	38	2038943	2047771	ECH
Lele37g0261	37	2068189	2072223	Lele37g0261	37	2068189	2072223	ECH
Lele37g0261	37	2068189	2072223	Lele39g1164	39	20333245	20337273	hybridization
Lele37g0261	37	2068189	2072223	Lele40g0241	40	1899087	1902805	hybridization

Showing 1 to 4 of 4 entries