Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0257 ATGCCTCTAATTCGACGCAGAAAAGGCGGAGAAGCTACAGAGTTGAAGATTCAGAGCGAAAGGACAGAAGAACAAGAAGATGATAAAAAGAAGGTAGCGGCGAAGCAGAGCAAGAAGGAGGAGAAGAAGAGCAAATGGTCTTGTGTGGATAGTTGTTGTTGGTTCATCGGTTGCATTTGTACCGTATGGTGGTTGTTGCTGTTTCTATACAAAGCTATGCCAGCTTCGTTTCCTCAGTATGTGACGGAGGCGATAACTGGACCGTTGCCGGACCCACCTGGTCTGAAACTGAAGAAAGAAGGATTGACCGCGAAGCATCCGGTGGTCTTCGTGCCGGGGATCGTTACCGGGGGCCTTGAGCTTTGGGAGGGTCACCAGTGTGCTGAGGGCTTGTTCCGGAAACGATTGTGGGGTGGTACATTTGGAGAAGTCTACAAAAGACCTTCATGCTGGGCAGAGCACATGTCACTGGACAATGAGACAGGATTAGATCCACCTGGCATTAGAGTCAGGCCTGTCTCTGGACTTGTAGCTGCTGATTACTTTGCTCCAGGATATTTCGTTTGGGCTGTTCTAATAGCTAACTTGGCTCGCATTGGTTATGAAGAAAAAACCATGTACATGGCTGCATATGATTGGAGAATATCATTTCAGAACACCGAGGTGCGTGATCAATCACTAAGTCGGATAAAAAGCAACATAGAACTTATGGTTGCTACTAATGGAGGCAAAAAGGCTGTTGTCATCCCACATTCCATGGGTGTGCTTTACTTTCTTCATTTTATGAAGTGGGTTGAAGCACCTGCTCCAATGGGTGGTGGAGGTGGACCAGATTGGTGTGCCAGACATATAAAGGCAGTGATGAACATTGGTGGACCATTTTTGGGTGTTCCAAAGTCTGTGGCTGGACTTTTCTCGGCTGAAGCCAGGGATATTGCTGTTGCCAGGGCAATTGCACCAGGTTTCTTAGATAATGATATGTTTCGCTTTCAAACCTTGCAACATGTAATGAAGATGACTCGCACTTGGGATTCAACAATGTCAATGATACCAAGAGGTGGAGACACCATATGGGGTGGTCTTGACTGGTCGCCAGAGGAAGGCTATCTCCCTAGCAAGAGAAAGCAAAATCATAATGATACTCAGTCGACAAGCCAAAACACTAATAACTCAACAATTTCTCAATCTAAACCTGTCAACTATGGGCGGATCATATCATTTGGGAAGGATGTGGCAGAAGCACCTTCTTCTGAGATAGAGAGGATTGACTTTCGGGGTGCCATTAAGGGTCCAAGTATTGCAAATACCACCTGTCGTGATGTGTGGACTGAATACCATGACATGGGAGTTGAGGGAGTCAGAGCTGTTGCTGAGTATAAAGTTTATACTGCTGGCTCTATTGTAGATCTGCTTCGTTTTGTTGCTCCAAAAATGATGGCTCGTGGCAGTGCTCATTTCTCTTTTGGAATTGCTGACAATTTGGATGATCCAAAATACGAGCACTACAAATATTGGTCAAACCCCTTGGAGACAAAATTACCAAATGCTCCTGATATGGAAATCTTTTCTTTATATGGAGTTGGCATACCAACTGAAAGAGCTTATGTTTACAAGTTATCTTCCTATGCTGAGTGTTACATTCCTTTTGAAATCGATACTTCTGCAGAAGGTGATGATGAGGATAGCTGTCTGAAGGATGGAGTTTATACTGTTGAAGGGGACGAGACAGTGCCTGCTCTGAGTGCAGGTTTCATGTGTGCTAAAGGTTGGCGTGGGAAAACCAGATTCAATCCTTATGGAGTCCGTACGTACATTAGGGAATATGACCATTCTCCTCCGGCCAACCTTCTTGAAGGCCGGGGCACGCAGAGTGGTGCTCATGTTGACATCATGGGAAATTTTGCATTGATTGAGGATGTTATTAGGGTGGCTGCTGGGGCTACCGGAGATGAACTGGGAGGTGATCAGGTATATTCAGACATCTTTAAATGGTCTGAAAAAATTAAGTTGCAACTGTGA 2019 0.4522 MPLIRRRKGGEATELKIQSERTEEQEDDKKKVAAKQSKKEEKKSKWSCVDSCCWFIGCICTVWWLLLFLYKAMPASFPQYVTEAITGPLPDPPGLKLKKEGLTAKHPVVFVPGIVTGGLELWEGHQCAEGLFRKRLWGGTFGEVYKRPSCWAEHMSLDNETGLDPPGIRVRPVSGLVAADYFAPGYFVWAVLIANLARIGYEEKTMYMAAYDWRISFQNTEVRDQSLSRIKSNIELMVATNGGKKAVVIPHSMGVLYFLHFMKWVEAPAPMGGGGGPDWCARHIKAVMNIGGPFLGVPKSVAGLFSAEARDIAVARAIAPGFLDNDMFRFQTLQHVMKMTRTWDSTMSMIPRGGDTIWGGLDWSPEEGYLPSKRKQNHNDTQSTSQNTNNSTISQSKPVNYGRIISFGKDVAEAPSSEIERIDFRGAIKGPSIANTTCRDVWTEYHDMGVEGVRAVAEYKVYTAGSIVDLLRFVAPKMMARGSAHFSFGIADNLDDPKYEHYKYWSNPLETKLPNAPDMEIFSLYGVGIPTERAYVYKLSSYAECYIPFEIDTSAEGDDEDSCLKDGVYTVEGDETVPALSAGFMCAKGWRGKTRFNPYGVRTYIREYDHSPPANLLEGRGTQSGAHVDIMGNFALIEDVIRVAAGATGDELGGDQVYSDIFKWSEKIKLQL 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0257 672 FunFam Phospholipid:diacylglycerol acyltransferase 1 152 340 - -
Lele37g0257 672 MobiDBLite consensus disorder prediction 7 36 - -
Lele37g0257 672 Pfam Lecithin:cholesterol acyltransferase 471 632 IPR003386 GO:0006629|GO:0008374
Lele37g0257 672 Pfam Lecithin:cholesterol acyltransferase 132 386 IPR003386 GO:0006629|GO:0008374
Lele37g0257 672 MobiDBLite consensus disorder prediction 368 396 - -
Lele37g0257 672 Gene3D alpha/beta hydrolase 142 336 IPR029058 -
Lele37g0257 672 SUPERFAMILY alpha/beta-Hydrolases 104 619 IPR029058 -
Lele37g0257 672 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 24 666 - -
Lele37g0257 672 MobiDBLite consensus disorder prediction 375 396 - -
Lele37g0257 672 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0257 Lele-ChrLele37 2042894 2048578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0257 148 672 Acyl Lipid Metabolism Gene Families AT5G13640 78.286 0.0 865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0257 37 2042894 2048578 Lele37g0257 37 2042894 2048578 ECH
Lele37g0257 37 2042894 2048578 Lele39g1168 39 20361046 20366233 hybridization