Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0252 ATGGCCCTTGAAGCTGCTTCCTCCTCTTCCTCTGCTCAATCGTTCCCCAAGGGGTATGATGTTTTCATCAGCTTTAGGGGTGACGACACTCGTGCCAACTTCACTAGCCATCTTTATGATGCTTTCTGCAGAAAGCAAATAAGAACTTACATAGACTACCAACTCCCCAAAGGAGAAGAGATCTCACAATCGCTTCTGCAAGCTATAGAGGATTCATATATATCAGTGGTGGTATTCTCTGAGAATTATGCTTCTTCAAGATGGTGCTTGGATGAACTCGCCCATATAATCCATTGCAAAACGGTTCAAGGACAGATTGTTGTTCCTGTCTTCTTTAAAGTTGATCCAACCCATGTACGCCATCAGACTGGGACTTATGAGGAAGCATTCCATAAACATGAGAGAGATCTCAAGGTTAGCCAACACAAGATGCAAATGTGGAAGCAAGCACTCAATGAAGCTGCAAACTTAGCTGGTTATGACTCTTACACATTCAGGGATGAATCTGAAATGATTCAAAAGATTGTCAAGGACATATTGCAAAAATTAAATCACAAGTACCCACCTGCTGAATTAAAAGGACTCGTAGGTATCGATAACAACTGCGCAAAGATTGAATTATTGTTGAAAGACACTAAAACCATTGGAATATGGGGCATGGGGGGCATCGGCAAATCAACCATTGCCAAAACAATATTTTTCAAATATTCTTCCCATTATGAAGGTTCTTGCTTCTTGGACAATGTGAGGGAAAATTGTGAAAATGGACTCGCTGAATTACGCCGTCAATTTCTCTCCCGTCTATTGAATGAAGATATTTGTATTGATAATCCAACAAATTTTATTGAGTCTAGGCTTAGTCGTATGAAAGTTTTCGTTGTTCTTGATGATATCAGTACTTTGGGACAACTAGAATATTTGCTTGGAGAACCTCATTGCTTTGGTCAAGGAAGTAAAATTCTCATCACAACAAGGGACAAGCATGTGCTCAGCAAAGGAGCAGATGCAATATATAAGGTTAAGGAATTAGAGTTTTCTCACTCCTATAAACTTTTCAACTTGAATGCCTTTAACACTGATCGGCCTATAATGGGGTATGAAGAGCTAACAGAAAGGGCAGTTGTTTATGCGAAAGGAATTCCACTGGCTTTAAAAGTTCTGGGTTCATATCTTCGTGGTAGAAGAGAAGTTGAATGGGAGAGTGCTTTAAGAAAACTTGATAAGAGTCCTCATCAAGATATTCAAAAGGACATGATTTACTTATCCTGACCGTTAAGTGGTGGCCCGGTATACTTCTCTTTCCTGAATTGTGTGCAATTGAATGAACAATCAATTCACAATATCACGGAGGCTGCCTGTTCTGTAATTGATTATGCATCGCATACAAATACAAACCACATGGATGTTTCTTCGATTCGTGTCTGCGGAAGCAAAGTACCAAGGTGGTTCAAATACAGGGCAGCACAAAGTTCTGTAATTGTTGAACTCCCTCGACTTTCAGACTATCTGTTCTTCTGCATGGTAATTGGTGTTTACTCAGAAATTGATTGTTCTGTTTCATTGGAATGCACATGCTACTTGGAAGGTGAGGCGGGAGGTCGTGAGGTGGAAGGTTATAAGGTGGCAAATTCACGACATCGTGTGAATGATCTAAAGACGAACAATGATCATGTTTTTATATGGAATGATGTCTGCAAATGGGCATTCATAATGAGTATAATTAGAGAAGGAGATCAACAGTTCTTCTCTAACTTAAAGCTTCGTTTTGAATTCACTGTTGAAACTTATTATAAAGTTAGCGAGGATAACCGAATTTGTTCTGCATCAAGAATGCCATTCTTAAAAGCACTTCGTCTAGGTTCCTCTTTTATGTTTGAAGTGATCAACGATTTGTGTCGTGTGGTATGTGACAGAGGATCTCCAGCAATTTTAATGGAGTGA 1941 0.3952 MALEAASSSSSAQSFPKGYDVFISFRGDDTRANFTSHLYDAFCRKQIRTYIDYQLPKGEEISQSLLQAIEDSYISVVVFSENYASSRWCLDELAHIIHCKTVQGQIVVPVFFKVDPTHVRHQTGTYEEAFHKHERDLKVSQHKMQMWKQALNEAANLAGYDSYTFRDESEMIQKIVKDILQKLNHKYPPAELKGLVGIDNNCAKIELLLKDTKTIGIWGMGGIGKSTIAKTIFFKYSSHYEGSCFLDNVRENCENGLAELRRQFLSRLLNEDICIDNPTNFIESRLSRMKVFVVLDDISTLGQLEYLLGEPHCFGQGSKILITTRDKHVLSKGADAIYKVKELEFSHSYKLFNLNAFNTDRPIMGYEELTERAVVYAKGIPLALKVLGSYLRGRREVEWESALRKLDKSPHQDIQKDMIYLSXPLSGGPVYFSFLNCVQLNEQSIHNITEAACSVIDYASHTNTNHMDVSSIRVCGSKVPRWFKYRAAQSSVIVELPRLSDYLFFCMVIGVYSEIDCSVSLECTCYLEGEAGGREVEGYKVANSRHRVNDLKTNNDHVFIWNDVCKWAFIMSIIREGDQQFFSNLKLRFEFTVETYYKVSEDNRICSASRMPFLKALRLGSSFMFEVINDLCRVVCDRGSPAILME 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0252 646 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
Lele37g0252 646 SMART till_3 18 157 IPR000157 GO:0007165
Lele37g0252 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 416 IPR027417 -
Lele37g0252 646 ProSiteProfiles TIR domain profile. 17 183 IPR000157 GO:0007165
Lele37g0252 646 Pfam NB-ARC domain 210 415 IPR002182 GO:0043531
Lele37g0252 646 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 185 - -
Lele37g0252 646 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 425 IPR044974 GO:0006952
Lele37g0252 646 PRINTS Disease resistance protein signature 377 391 - -
Lele37g0252 646 PRINTS Disease resistance protein signature 285 299 - -
Lele37g0252 646 PRINTS Disease resistance protein signature 214 229 - -
Lele37g0252 646 Pfam TIR domain 19 197 IPR000157 GO:0007165
Lele37g0252 646 Gene3D - 181 338 IPR027417 -
Lele37g0252 646 Gene3D - 343 422 IPR042197 -
Lele37g0252 646 Gene3D - 17 180 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0252 Lele-ChrLele37 2010629 2015437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0252 14 399 WRKY Transcription Factor Family AT4G12020 29.899 1.05e-38 152