Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0251 ATGTTGACCTGCATTGCTTGTTCCAAGCAGCTTAATGACAAGAGATCTCTTCCCCAACAAGATGATCAAGAAGAAGCTGCGGATACTCCCAGCACCAGGCAGGCCATTAAGGCCCTCACCGCACAGATCAAGGACATGGCAGTGAAGGCTTCTGGGGCGTATAAAAATTGCAAGCCTTGTTCAGGATCTTCGAATGGTAACAGGAATCAGAACTATGCTGATTCTGATATGGCTTCAGAATCAGCGAGATTTCACTGGGCGTACAAAAGGGCTGGGAGCTCAAACTCAACCCCAAGGCTTTGGGGAAAGGAGATGGAGGCTAGACTGAAAGGACTCTCTAGCGGGGAAGGAACTCCGGCGTCAGTGAGTGGCCGGACTGAGTCGGTGGTGTTCACGGAGGAGGATGAGCCCAAGGAATGGGTTGCTCAAGTAGAGCCTGGTGTACTTATAACTTTTGTTTCATTGCCTCAAGGTGGGAATGATCTGAAACGAATACGGTTCAGCCGGGAAATGTTTAATAAATGGCAAGCTCAAAGGTGGTGGGCTGAGAATTATGACAAGGTCATGGAGTTGTACAATGTTCAAAGGTTCAATGAACAAGTTGGTCCACTGCCAACGCCGCCAAGATCCGAAGATGAGAGCTCGAAGATTGAATCTGTTAGGGACAGCCCTGTCACGCCTCCTCTTAACAAAGAGCGTCCACCTCATCATCTTCTTCACCGTCAAATGGGGATGGGATACTCATCATCAGATTCACTGGATCATCACCACACGATGCAACAACAACGCCCATGCTATGAAACAAGCGGCTTAGCTTCGACACCTAAACTTTCTAGCATCAGCGGGGCAAAGACAGAAACATCGTCCTTAGACGGTTCCGTGAGGACTAGTTCATCAAGAGAGGGAGATCAGTCTGGCGAGCTTTCATTCAGCAATGCCAGTGATATGGAGACTGAATGGGTTGAACAGGATGAGCCAGGAGTATACATCACCATCAGGGCATTGCCAGGGGGAACCCGAGAACTCAGGCGAGTCCGGTTCAGCTTTCTATGTTATTGTGGTGCAGCCGAGAAAGGTTTGGAGAAATGCACGCGAGGTTGTGGTGGGAGGAGAACCGGGCGAGGATACAGGAGCAATATTTGTGAGACAAAACAGTTTGAGGAGGCTAGCAGGATTATGAGGAAGTAG 1188 0.4933 MLTCIACSKQLNDKRSLPQQDDQEEAADTPSTRQAIKALTAQIKDMAVKASGAYKNCKPCSGSSNGNRNQNYADSDMASESARFHWAYKRAGSSNSTPRLWGKEMEARLKGLSSGEGTPASVSGRTESVVFTEEDEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNEQVGPLPTPPRSEDESSKIESVRDSPVTPPLNKERPPHHLLHRQMGMGYSSSDSLDHHHTMQQQRPCYETSGLASTPKLSSISGAKTETSSLDGSVRTSSSREGDQSGELSFSNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSFLCYCGAAEKGLEKCTRGCGGRRTGRGYRSNICETKQFEEASRIMRK 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0251 395 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 348 IPR044532 -
Lele37g0251 395 MobiDBLite consensus disorder prediction 262 317 - -
Lele37g0251 395 MobiDBLite consensus disorder prediction 200 318 - -
Lele37g0251 395 MobiDBLite consensus disorder prediction 13 33 - -
Lele37g0251 395 ProSiteProfiles BRX domain profile. 318 375 IPR013591 -
Lele37g0251 395 Pfam Transcription factor BRX N-terminal domain 24 60 IPR027988 -
Lele37g0251 395 Pfam Transcription factor regulating root and shoot growth via Pin3 317 348 IPR013591 -
Lele37g0251 395 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
Lele37g0251 395 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0251 Lele-ChrLele37 1995231 1998335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0251 1 348 Major Intrinsic Protein MIP AT1G31880 44.904 3.11e-84 259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0251 37 1995231 1998335 Lele37g0251 37 1995231 1998335 ECH
Lele37g0251 37 1995231 1998335 Lele39g1173 39 20409877 20413883 hybridization
Lele37g0251 37 1995231 1998335 Lele40g0235 40 1859348 1862349 hybridization