Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0240 ATGGGAAGGAGTCCTTGCTGTGAGAAGGAAGGTGTGAATAGAGGAGCATGGACTGCTATTGAAGACAAGATTCTCATTGACTACATTAAGATTCACGGCGAAGGAAAATGGAGAAATCTTCCCAAAAGAGCAGGTCTGAAGAGATGTGGAAAGAGTTGCAGGCTGAGATGGTTAAATTATCTGAGACCTGATATCAAAAGGGGAAATATTACTCATGATGAAGAGGATCTCATTATCAGGCTTCATAAACTTCTCGGAAACAGGTGGTCTTTGATAGCTGGAAGACTACCAGGACGAACAGACAATGAAATAAAGAACTATTGGAACACCAACATCGGAAAAAAGCTTCAAAATGGAAACTCAAAAACAAAGTCGTCTCCTACATCAAGCGGCTCGCCAAGCCAAGCCAGACAGGAAAAGGCATCAGACTCAGACTCCGACCCAAAAGCCCCACAAAAACCGACCGGGCCATGCCACCTGGTTCGGACCAAAGCAACAAGGTGCACCAAAGTGATATGGAGCAGTGTGAAGCAAAGAAAATGA 543 0.4438 MGRSPCCEKEGVNRGAWTAIEDKILIDYIKIHGEGKWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITHDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNIGKKLQNGNSKTKSSPTSSGSPSQARQEKASDSDSDPKAPQKPTGPCHLVRTKATRCTKVIWSSVKQRK 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0240 180 FunFam Transcription factor TT2 70 143 - -
Lele37g0240 180 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele37g0240 180 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lele37g0240 180 MobiDBLite consensus disorder prediction 113 139 - -
Lele37g0240 180 MobiDBLite consensus disorder prediction 113 162 - -
Lele37g0240 180 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele37g0240 180 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Lele37g0240 180 SMART sant 13 63 IPR001005 -
Lele37g0240 180 SMART sant 66 114 IPR001005 -
Lele37g0240 180 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele37g0240 180 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 144 - -
Lele37g0240 180 FunFam MYB-related transcription factor 13 66 - -
Lele37g0240 180 CDD SANT 71 112 IPR001005 -
Lele37g0240 180 Gene3D - 7 67 - -
Lele37g0240 180 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele37g0240 180 CDD SANT 16 61 IPR001005 -
Lele37g0240 180 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele37g0240 180 Gene3D - 69 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0240 Lele-ChrLele37 1904921 1907677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0240 1 116 MYB Transcription Factor Family AT2G16720 76.724 1.47e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele37g0240 Myb_DNA-binding 2.4e-14 CL0123