Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0237 ATGGCTTCTGAGACTGACAATTGTATTAAGAGGAAAGTGCAGAAAGTTGACGAAGCCATGACCAATGTGCCTCTTAGTAAAGCAGCATGGACACCAGAAGAAGATAAGAAACTAGCTGAAGTTATTGCAGTTCATGGGGCAAAAAGGTGGAAGTCCATTGCATCTAAAGCAGGTCTTAATCGGTGTGGTAAGAGTTGCAGGTTGAGATGGTTGAACTATCTCAGACCCAACATCAAGAGGGGAAACATATCAGACCAAGAAGAGGATTTGATTCTTCGGCTTCATAAACTCCTTGGAAACAGGTGGTCATTAATCGCTGGTAGACTACCAGGGAGAACAGATAATGAGATAAAGAACTATTGGAATTCTCATTTGAGCACGAAGATAAAGCAGATGGAGAAGCGCTCAAGTGAGAGTTCAACCAGAGAAGAGAATCAAGAGGTGGTGGTAGAACAACACAAGATTCCCGAAGAAGCTGAGGTAATATGCAGAGAAGAGATTTCCACTGAGGAAACTGAAGAATCATCATCAAAACCCAGTTTTGATGTGGATGGGTTCTTTGATTTTTCTGTAGAGGAAGGTCCATTGAATCTGGAGTGGGTTAGCCAGTTCCTTGAACTTGATGAAACAACTCTTGGACACTTCTCATAA 651 0.4209 MASETDNCIKRKVQKVDEAMTNVPLSKAAWTPEEDKKLAEVIAVHGAKRWKSIASKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSTKIKQMEKRSSESSTREENQEVVVEQHKIPEEAEVICREEISTEETEESSSKPSFDVDGFFDFSVEEGPLNLEWVSQFLELDETTLGHFS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0237 216 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 129 IPR017930 -
Lele37g0237 216 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 21 168 - -
Lele37g0237 216 SUPERFAMILY Homeodomain-like 25 121 IPR009057 -
Lele37g0237 216 ProSiteProfiles Myb-like domain profile. 22 74 IPR001005 -
Lele37g0237 216 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Lele37g0237 216 CDD SANT 84 125 IPR001005 -
Lele37g0237 216 Pfam Myb-like DNA-binding domain 29 74 IPR001005 -
Lele37g0237 216 Pfam Myb-like DNA-binding domain 80 125 IPR001005 -
Lele37g0237 216 SMART sant 26 76 IPR001005 -
Lele37g0237 216 SMART sant 79 127 IPR001005 -
Lele37g0237 216 MobiDBLite consensus disorder prediction 131 150 - -
Lele37g0237 216 FunFam MYB-related transcription factor 26 79 - -
Lele37g0237 216 CDD SANT 29 74 IPR001005 -
Lele37g0237 216 Gene3D - 28 79 - -
Lele37g0237 216 Gene3D - 83 155 - -
Lele37g0237 216 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 74 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0237 Lele-ChrLele37 1845595 1846563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0237 27 129 MYB Transcription Factor Family AT5G40330 68.932 6.74e-52 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele37g0237 Myb_DNA-binding 1.3e-18 CL0123