Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0236 ATGAGCCATTGGATGGGGTTCTCTCTGACTCCACACTTGAGGATTGATGAAGTATATGGGAATGGTAGAGAAAACCAAGAAGAACACCTTGGAGGCTATCCTCCTTCTCATCCTCGCTTGTCGGTTATGCCTTTAAGATCAGATGGCTCTCTCTGTGTTGCTGACCCTTTTAGGCACTCTTGTGAAGCTGAAGAATGGAGGTATGATAATGGAGTTGCAGGAGGAAGCTCTAATGAAGAAGGTCCAAAGCTTGAAGATTTCTTGGGTTGTTACTCAAACTCCTCTGATATTGTTGAAACCAAAGCGTATTGCCAAGGCAGTACACAACAACAAGACCAAGACCAGAACCAGAGCCAGAACCAGGACAGCATTTCCAGCCGAATCAATGTGAATGTGGCGCCAAGCTTCAGCACCAACACTGAGATAGAAGCTAATAATGGGGAAAATTTCACAAACCCTCCTTCCTTAATCCAATCTCTTCATGCATACAATGATGGTAACTCGCGAGCTGTAATCCCAAATAATGGCATGTACAAGTCCTGGTTGGCTCAATCTAAATCTTCTGCGGAAGTAAATGGCTATAACTACCAATCTCTAGCTCTAACTATGAGTCCTAGTTTACAAAACGCTCTTTGTGGTGCAATTTCCCCGGTTCAAGTTGAAGATGATGCTCGCAAAAGGTCAATGTCAAAATCTCTTGCTACTAGAGAACCTGTGCCTCGCAAATCTATTGATACCTTTGGTCAAAGAACATCTCAATATAGAGGTGTTACAAGGCATAGATGGACTGGGAGATATGAGGCCCATTTGTGGGATAATAGTTGCAGGAAGGAAGGGCAAACAAGGAAAGGAAGGCAAGGTGGTTATGATAAGGAAGAAAAAGCAGCAAGGGCTTATGACTTAGCTGCGCTCAAGTATTGGGGTCCAACTACTCACATAAATTTCCCTTTAAGTACATATGAGAAGGAACTTGAAGAGATGAAGCACATGACTAGGCAAGAATTCGTGGCCAATTTGAGAAGGAAGAGCAGTGGATTTTCAAGGGGTGCTTCTGTGTATAGGGGCGTGACAAGACACCATCAACATGGAAGATGGCAAGCTAGGATTGGTAGAGTTGCAGGAAACAAAGACTTGTATCTCGGTACATTTAGCACACAAGAGGAAGCTGCAGAAGCATATGATATTGCAGCAATAAAGTTCAGGGGAACTAGTGCTGTGACCAACTTTGATATAAGCCGGTATGACGTGAAGAGAATATGCTCGAGCTCGACTCTCATTGCTGGAGATCTAGCGAAGAAGTCCCCGAAAGACTTAGCCCCAGCTCCCGGCGTCGCCGCCACCACCTCAACCGACGACTTAAATTCTAATGCATCCACGTCGTTGGCGGTTACGACGGCTCATCAGCAACAGTCACAGCCGTTTTTGGCTGTAACAAATGGAGAGCATTCTTCTGATGAGTTAGCCAACATGATTTGGAATGATGATGGGAACCACACGGAGAAACAGGTGAATGATCAGAGTTCTTCAGAGAACAGCAAGAACAATAACAATGGTAAGAATGCGACAAACTCAAAAGAGAGTCCCAAGTGTTCAGTGGGAATGGGGAATGAGTTCGGGGTGAATAACGATTCAGGGTTTGGAGCTGGGTTCTTCTCGTTGCAGGCACCAAAGTATAATGATGACGATGATGGGAACAACGAGGACAACGGTAATGATAACTTGAATAATGACAATCGCATTGGGAACATGGGACTGGTTCATCAAGTTCCCATGTTTGCTTTGTGGAATGAATGA 1794 0.4459 MSHWMGFSLTPHLRIDEVYGNGRENQEEHLGGYPPSHPRLSVMPLRSDGSLCVADPFRHSCEAEEWRYDNGVAGGSSNEEGPKLEDFLGCYSNSSDIVETKAYCQGSTQQQDQDQNQSQNQDSISSRINVNVAPSFSTNTEIEANNGENFTNPPSLIQSLHAYNDGNSRAVIPNNGMYKSWLAQSKSSAEVNGYNYQSLALTMSPSLQNALCGAISPVQVEDDARKRSMSKSLATREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQGGYDKEEKAARAYDLAALKYWGPTTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIAGDLAKKSPKDLAPAPGVAATTSTDDLNSNASTSLAVTTAHQQQSQPFLAVTNGEHSSDELANMIWNDDGNHTEKQVNDQSSSENSKNNNNGKNATNSKESPKCSVGMGNEFGVNNDSGFGAGFFSLQAPKYNDDDDGNNEDNGNDNLNNDNRIGNMGLVHQVPMFALWNE 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0236 597 SUPERFAMILY DNA-binding domain 252 318 IPR016177 GO:0003677
Lele37g0236 597 SUPERFAMILY DNA-binding domain 351 412 IPR016177 GO:0003677
Lele37g0236 597 SMART rav1_2 253 322 IPR001471 GO:0003700|GO:0006355
Lele37g0236 597 SMART rav1_2 352 416 IPR001471 GO:0003700|GO:0006355
Lele37g0236 597 CDD AP2 252 318 IPR001471 GO:0003700|GO:0006355
Lele37g0236 597 FunFam AP2-like ethylene-responsive transcription factor 351 412 - -
Lele37g0236 597 MobiDBLite consensus disorder prediction 502 530 - -
Lele37g0236 597 CDD AP2 351 412 IPR001471 GO:0003700|GO:0006355
Lele37g0236 597 Gene3D AP2/ERF domain 252 318 IPR036955 GO:0003700|GO:0006355
Lele37g0236 597 Gene3D AP2/ERF domain 352 412 IPR036955 GO:0003700|GO:0006355
Lele37g0236 597 MobiDBLite consensus disorder prediction 491 530 - -
Lele37g0236 597 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 78 506 - -
Lele37g0236 597 MobiDBLite consensus disorder prediction 556 579 - -
Lele37g0236 597 PRINTS Ethylene responsive element binding protein signature 392 412 IPR001471 GO:0003700|GO:0006355
Lele37g0236 597 PRINTS Ethylene responsive element binding protein signature 254 265 IPR001471 GO:0003700|GO:0006355
Lele37g0236 597 Pfam AP2 domain 253 308 IPR001471 GO:0003700|GO:0006355
Lele37g0236 597 Pfam AP2 domain 351 402 IPR001471 GO:0003700|GO:0006355
Lele37g0236 597 FunFam AP2-like ethylene-responsive transcription factor ANT 252 318 - -
Lele37g0236 597 MobiDBLite consensus disorder prediction 433 454 - -
Lele37g0236 597 ProSiteProfiles AP2/ERF domain profile. 352 410 IPR001471 GO:0003700|GO:0006355
Lele37g0236 597 MobiDBLite consensus disorder prediction 104 124 - -
Lele37g0236 597 ProSiteProfiles AP2/ERF domain profile. 253 316 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0236 Lele-ChrLele37 1834951 1838173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0236 1 435 AP2-EREBP Transcription Factor Family AT1G72570 50.531 1.12e-134 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele37g0236 AP2 1.2e-09 CL0081