Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0223 ATGGTGAGCGGAGAAGAGGTTAAATTGATTCATTCTAAGCTGAATGAATGTCTCCTTTGCATGTTTCTCCCAAAAGTAAACTTGTCCTTAATTTCCACAAGAAAACCCAACCTAGTTAATATCCAGTATCCAGTATCCAAATGTCGTCGTCCATTGCAACCGCAAGTGGATAAGATTCCTTATCTCCAAACAAACACTTGCATTTCATTCTTCTTCCCCGGTGTCATTCATCCCCCAAACCCACCAATCTCACAAATGAAAGCTCTGCTCCTAAGTAAACCTGCTCCCCACTTCAATTTTTCTTCCAAACATACACATTCTTCTTCACCTCTTTTCACTTTTCCCACACATTCTCTTCGCCTCCAACCAACCAACACCTCTTCATTCACCTTCCGTGCCATTCAAAATCAAGGCCAGCAAATTGTCCAGGACACGCCTCCTCCCATCGACAATGAAGATGAATCCTACGGCGAAGTTAAAGGTATTATCGGAAGCAGGGCCCTTGAAGGCGGCACTGGCATGGAGTATTTGATCGAATGGAAAGATGGCCATGACCCCTCATGGGTGCCCTCCGATTTCATCGCCAAAGATGTCGTGGCCGAGTACGAGACCCCGTGGTGGACCGCCGCCAAGAAAGCCGATGAATTCACTCTCAAGCAGCTCATTGACGCCGACGACGGCAGGGACATCGACGCGGTCGACAGCGACGGGCGAACCGCGCTCTTGTTCGTATCGGGTCTGGGTTCGGAGCCGTGCGTGAGGGCGCTGGCCGAAGCGGGCGCAAATCTGGATCATCGAGATAATTCGGGGGGCCTGACGGCGCTTCACATGGCGGCCGGGTACGTAAGGCCCGGCGTGGCAAAGCTTCTGGTAGATCTTGGGGCGGACGTTGAGGCGGAAGACGACAGGGGACGGACGCCGATAGAGCTAGCGAAGGAAATCCTGAACGCAACGCCGAAAGGGAACCCGATGCAGTTCGGGAGGAGGATAGGGCTAGAGAGCGTGATAAGATCTTTGGAGGCGGCCATATACGAGTATGCAGAGGTGGAGGGGATATTGGAGAAGAGAGGGAAGGGAGAGAACTTGGAGTATTTGGTGAAATGGAAAGACGGAGGAGGGAACGAGTGGGTGAAGGCCAAGTTCGTCGGAGAGGATGTGGTGAGAGATTACGAAGCGGGACTGGAGTACGCGGTAGCGGAGAGAGTGATGGGAAGAAGAGACGGGGACGATGGGAAAGCCGAGTTTCTGGTAAAATGGGCCGACATGGAGCAGCCCACGTGGGAGCCCGAAGACAATGTGGATCCTCAGCTCATACAGGAATTTGAACAGGCCCAAAACACCAGCCCCAGCCCAAAATGA 1359 0.5254 MVSGEEVKLIHSKLNECLLCMFLPKVNLSLISTRKPNLVNIQYPVSKCRRPLQPQVDKIPYLQTNTCISFFFPGVIHPPNPPISQMKALLLSKPAPHFNFSSKHTHSSSPLFTFPTHSLRLQPTNTSSFTFRAIQNQGQQIVQDTPPPIDNEDESYGEVKGIIGSRALEGGTGMEYLIEWKDGHDPSWVPSDFIAKDVVAEYETPWWTAAKKADEFTLKQLIDADDGRDIDAVDSDGRTALLFVSGLGSEPCVRALAEAGANLDHRDNSGGLTALHMAAGYVRPGVAKLLVDLGADVEAEDDRGRTPIELAKEILNATPKGNPMQFGRRIGLESVIRSLEAAIYEYAEVEGILEKRGKGENLEYLVKWKDGGGNEWVKAKFVGEDVVRDYEAGLEYAVAERVMGRRDGDDGKAEFLVKWADMEQPTWEPEDNVDPQLIQEFEQAQNTSPSPK 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0223 452 ProSiteProfiles Ankyrin repeat profile. 270 302 IPR002110 GO:0005515
Lele37g0223 452 SUPERFAMILY Ankyrin repeat 201 313 IPR036770 -
Lele37g0223 452 ProSiteProfiles Ankyrin repeat region circular profile. 270 302 - -
Lele37g0223 452 ProSiteProfiles Ankyrin repeat profile. 236 268 IPR002110 GO:0005515
Lele37g0223 452 SUPERFAMILY Chromo domain-like 395 451 IPR016197 -
Lele37g0223 452 Pfam Ankyrin repeats (many copies) 256 311 IPR002110 GO:0005515
Lele37g0223 452 Pfam Chromo (CHRromatin Organisation MOdifier) domain 399 443 IPR023780 -
Lele37g0223 452 SMART ANK_2a 201 232 IPR002110 GO:0005515
Lele37g0223 452 SMART ANK_2a 236 265 IPR002110 GO:0005515
Lele37g0223 452 SMART ANK_2a 270 299 IPR002110 GO:0005515
Lele37g0223 452 CDD CD2_cpSRP43_like 155 204 - -
Lele37g0223 452 SUPERFAMILY Chromo domain-like 153 206 IPR016197 -
Lele37g0223 452 CDD CD2_cpSRP43_like 345 392 - -
Lele37g0223 452 Gene3D - 201 342 IPR036770 -
Lele37g0223 452 SMART chromo_7 155 207 IPR000953 -
Lele37g0223 452 SMART chromo_7 396 446 IPR000953 -
Lele37g0223 452 SMART chromo_7 345 395 IPR000953 -
Lele37g0223 452 Gene3D - 393 445 - -
Lele37g0223 452 SUPERFAMILY Chromo domain-like 345 392 IPR016197 -
Lele37g0223 452 Gene3D - 153 200 - -
Lele37g0223 452 Gene3D - 343 392 - -
Lele37g0223 452 PANTHER MYOTROPHIN 172 321 - -
Lele37g0223 452 CDD CD3_cpSRP43_like 394 442 - -
Lele37g0223 452 ProSiteProfiles Chromo and chromo shadow domain profile. 397 452 IPR000953 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0223 Lele-ChrLele37 1725304 1727386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0223 224 311 CAMTA Transcription Factor Family AT5G09410 35.106 4.82e-07 50.4