Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0217 ATGTCGACCTTTTCTGATGCCGCGGCGGATAACCGGAGGGGCGGCGAGCCGGCGGAGAGGTCCAATTTCTCCCACACTTACAATCTCTTAAGCCAATTCTTGAAGGAGAAGCGTAGTTCTGGTGCTCTGAGCCTTGGAATGTGCGGGAAAATTGAACCCAGAGGAAATCCAACTTCTACGATGAATTTGTTAACATCCCTGGAAAAATCTGATGATACCTCGAAACTTAGTACTTCAGCTATGGATTTTCTTCCTCAGCTAGTAGAAAACCAGTCTATTATTAGGTCACAGACCAAGGCAGAGCCTAAAACTCCCCAAATGGCAATATTTTACTCCGGCAAGGTGTTGGTGTTTGACGATTTTCCGCCGGAGAAGGCGACGGAGATCATGGAGCTAGCCACCAAGTTAAGCCCTGATAATTCTGGGATCATCAAAAACACCCCAAATGCTTCTGTAACTCTTCAAAATATCAACGAGGTTAAGGTGAATCAAACAAGCACATCCCAAGAAGGTTCTCGTCCAGGCTCTGTCGCTTCTGGTTCAGATATGAGGTACCCGAGGAGAGCTTCGCTTTTGAAATTTCTGGAGAAAAGAAAAGAAAGGGTCATTGCAAGAGGACCATATCATATGAACCCTGAGCATGAAGGAGGCATATCTAGAGGCCACCCTGAAGATCAATCTTGCAAACCCTTTGACCTTAACTTGTAG 708 0.459 MSTFSDAAADNRRGGEPAERSNFSHTYNLLSQFLKEKRSSGALSLGMCGKIEPRGNPTSTMNLLTSLEKSDDTSKLSTSAMDFLPQLVENQSIIRSQTKAEPKTPQMAIFYSGKVLVFDDFPPEKATEIMELATKLSPDNSGIIKNTPNASVTLQNINEVKVNQTSTSQEGSRPGSVASGSDMRYPRRASLLKFLEKRKERVIARGPYHMNPEHEGGISRGHPEDQSCKPFDLNL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0217 235 ProSiteProfiles Tify domain profile. 100 135 IPR010399 -
Lele37g0217 235 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 15 212 IPR040390 -
Lele37g0217 235 Pfam Jas motif 187 208 IPR018467 -
Lele37g0217 235 MobiDBLite consensus disorder prediction 205 235 - -
Lele37g0217 235 MobiDBLite consensus disorder prediction 1 21 - -
Lele37g0217 235 MobiDBLite consensus disorder prediction 162 176 - -
Lele37g0217 235 Pfam tify domain 101 133 IPR010399 -
Lele37g0217 235 SMART tify_2 100 135 IPR010399 -
Lele37g0217 235 MobiDBLite consensus disorder prediction 162 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0217 Lele-ChrLele37 1686214 1687589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0217 19 219 Tify Gene Family AT1G19180 32.609 5.38e-24 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele37g0217 tify 3.2e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0217 37 1686214 1687589 Lele37g0217 37 1686214 1687589 ECH
Lele37g0217 37 1686214 1687589 Lele39g1209 39 20777585 20778982 hybridization
Lele37g0217 37 1686214 1687589 Lele40g0206 40 1594679 1596077 hybridization