Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0204 ATGCCGGATTCTTCCTTTGAATTCGACTACAACTCCTCAGGCCAACACTATACCACGCGACGCTACCCCTCGACCCCAGTGAGTTCTCGCAATACGTCTCGGTCTTTCACGGCGGCGTCGAGCTCCCTGGGAAACCACAATTCTGGAGTTGGGCGCAGGAACAGGGCTCCGGCCATTCCCATTAACTCCGACGACGACCGTTCATGGCAGACAGAAGTTTCGTGGCAATTTGAGCCCACTGGGTGGCGGGAGTACGGTAGTAGAAACTTGGGCTCTCTTTTCACTCCATGGGCCGAAGGCCCGATCCAATCAGATCGGAGTCGGGTTTTCCGTCGGTCCGCTAGAGATTATTACCTTTCAAGAACGAGCGGGTTCTCCAGAGGAAACCGTTTTGCCGCGAACTCGGATTCTGAAGCTTCAGGCTACGTCATTCCGTCTGGGAGAGTCGAGCTTCAGAGCTATGTCGCTGAGGAGAATGGCGATCAGAATAGCAAGTCTTATAGTGGATTTTCGAGATTGGATATCATCAAAGAAGGAATTATTGGTACTAGAAAGGGGAATAATATTCCATTGGCTGAAGAAGATGAACTTAGTTTTACGTCTTTTAGTGTTGGTCAAAAACCAGAACTGTCATATACGACACATGATAGTTATAGTGGTCATGGGCAGATAGTGCCAGTGCATTTCAGCCATGGCTACAGCGGGTATAGTCATCATCATGGGATCGACAAGTTTTCTGGGTTTCGTGAAGATAGTGATCAGGAGGATATGGATTATGATGATGAAGATTTGGAGCCTCCAAAAGCAGTTGGGTTGTTCAGTTTCTTTCGGTACTCAAAAAAGTGGGATTTAGTGCTTGTGTTTTTGGGTTGCTTGGGGGCTCTCATAGATGGAGGTTCACTTCCTTGGTATTCTTATCTTTTTGGACAAGTAGTCAATAAGCTTTCTGAACAATCAAGAGATGGTGCTGACAAAGACCAGATAATGAAGGATATAGTCATGAGATGCATATATATGACTGTGTTATCTGCAGTGGTGATGGTTGGAGCATATATGGAGATCACATGTTGGAGGTTGGTAGGAGAGCGATCTGCTCAAAGGATAAGAAGAGAATATCTAAGAGCAGTTCTTCGTCAGGACATTAGCTTTTATGATACAGAGATAAGCACTTCTGATATTATGCATGGGATTGCAAGCGATGTTGCACAAATTCAAGAAGTTATGGGAGATAAGATGGCTCACTTCGTTCATCACCTATGCACATTCATAACTGGGTATATAGTTGGGTTTGTAAGGTCATGGAAAGTTGCCCTGGTGGTCCTCTCAGTCACCCCAGTGACCATGTTCTGTGGTTTAGCTTACAAGGGCATTTATGGTGGTTTATCAGCAAAAGAGGAAGCTTCTTATAGAATGGCAGGTAGCATTGCGGAGCAGACCATCAGTTCAATTAGGACAGTTTTTTCTTTTGTTGCTGAAAGCCAGATGGCTATAAAATATTATGACCTGCTGCAAAATTCAATCCCAGTTGGGGTCAGAATTGGTTTTGCCAAGGGTGCAGGCATTGGAGTTATCTATTTAGTAACGTACTCAACATGGGCCTTGGCTTTCTGGTATGGCTCTATCTTAATTGCCAAGGGAGAGATTGATGGAGGTCGGGCCATTGCCTGTTACTTTGGAGTCATGGTAGGGGGAAGAGGCTTGGCATTGGCACTCTCATATTTTGCGCAGTTTGCACAAGGCATTGTTGCAGCAAGCCGAGTATTTGAAATCATTGAGAGAGTCCCTGAGATTGATCCCTACAGCCCTGAGGGAAGGAGGCTCTCTAATGTTCGTGGAAGGATTGAGTTCAAAAGTGTTATCTTTGCATACCCAGCTCGTCCTGATGCTCTAATCCTTAATTCCCTTAAATTAGTTATTCCGTGTTCAAGAACTACGGCGCTGGTTGGTGCCAGTGGAGGGGGCAAGTCCACTATTTTTGCTCTAGTAGAGAGGTTTTATGATCCTATTGAAGGGATAATAACCTTAGATGGTCATGATTTGAGGACACTGCAAATCAAGTGGCTCAGAGATCAAATTGGAATGGTGGGTCAGGAACCGATTCTTTTTTCCACAACCATTCTGGAAAATGTGATGATGGGGAAGGACAACGCCACCAAGAAAGAAGCAATTGCAGCTTGCATTGCGGCTGATGCCCACAACTTCATCTCTATCCTACCCCTACGTTATGACACTCAGGTTGGAGCTAAGGGTACGCAACTCTCAGGGGGTCAAAAGCAGCGAATTGCATTGGCTAGAGCTATTATCAAAGATCCTAAAATCCTTCTATTGGATGAACCTACCAGTGCTCTTGATGCTGAGTCAGAGTCTGTGGTCCAACAGACTATTGACAAGATTTCTGCTGGACGAACAACCATTGTCATTGCTCACAGGATAGCAACAGTAAAGAATGCCCATACTATTGTGGTTCTTGAAAATGGTTCTGTGACTGAGATTGGTGATCATCGACAGCTTATGGGAAAGGCGGGTGCCTACTATAACCTTGTCATGCTTGCTTCGGAAGCCGCATCGAAACCAGTGTCTAACAGCATACAAAAGGTTAATGATTTTTCTGTCTATGAGAACTCAGTTCCTGATATAACAAGATCAAGAAGTACTTTAGATATCTCACGGTCCAACTTAAAATCCACTCGAGATGAAAAACAAGCTGATATGGAAGGTGAGCAACAGAAGCCCAGAAAGTTTCAACTTTCTGAGATATGGAAACTGCAAAAACCGGAGTTTGTGATGCTGTTTTCAGGATTTGTTCTGGGTATGCTTGCTGGTGCTTTTCTCTCCATTTTTCCATTGATTTTAGGCCTAGCCCTTGAAGTCTACTTTAAACAGGACACTTCAACAATGAAAACAGATATTAACCATCTATGTTTAGTACTTGTTGGGCTAGGGTTTGGTTGCATAATCTCTCTGACTGGACAACAAGGTTTGTGTGGTTGGGCTGGAACTAAGCTCACAATCAGAATTAGAGACCTTCTTTTTCGATCCATACTAAAACAAGAACCCGGGTGGTTTGATTTTGAAGAAAACTCCGCTGGAGTGCTAGTGTCAAGGCTATCTATTGACTGTATTAGTTTTCGATCAGTGCTTGGTGATCGAGTTTCTGTCCTTCTAATGGGACTGAGCTCAGCTGCTGTTGGGCTTGGTGTGTGCTTTAAATTTGATTATAGAATAACTCTGTTGGCTGCTACACTAACCCCTTTCACTCTTGGTGCAAACTATCTAAACTTGATTATAAACCTTGGACCACGAGTCAACAATGATTCCTTTGCCAGAGCTAGTAACATCGCTTCTGGTGCAGTTTCAAACATAAGAACAACTATTGCATTTTCTGCCCAAGAACAGATAATCAAATCCTTTGATCGAGCTTTATCCGAGCCTAGGAAAAAATCAGTAAAAAGATCACAGATTCTCGGTGTAATGCTTGGGTTCTTCCAAGGTGCCATGTATGGAGCATACACCTTAACCCTTTGGTTTGGCGCCCTCCTTGTAAAACAAGGCAAAGCACAATTCGGGGATGTAGTCAAGATTTTTCTCATCCTTGTTTTGAGCTCATTTTCTGTGGGACAACTAACTGGTTTAGCACCAGATACTTCTTTGGCAGCTACAGCAATCCCAGCTGTTCTAGATATCATACACCGTAGACCATTGATAGGGAATGATAAGATGAAAGTTAAGAAACTAAAAAGATCAGAGCTATTGAAGCTAGAATTCAAAATGGTGACATTCGCGTACCCATCTAGGCCTGAGGTGATAGTGTTGAGGAATTTCAATTTGAAGGTCAAAGGTGGAAGCACGGTTGCCTTGGTAGGGGCAAGTGGATCAGGAAAATCAACAGTCATATGGTTGATACAGAGGTTCTATGATCCAAACCAGGGGCAGGTGATGATGGGTGGGTTGGATTTGAGAGACATTGATGTGGAGTGGTTGAGGAGGCAAACAGCTTTGGTGGGTCAAGAACCTGCACTATTCGCTGGGAGTATAAGGGAGAATATTGCCTTTGGAAACCCAGAAGCTTCCTGGGCTGAAATTGAAGTCGCGGCAAAGGAAGCTTACATTCACAAATTCATTAGTAGCCTTCCTCAAGGTTATGAAACTCAGGTTGGTGAGAGTGGGGTCCAGCTATCAGGTGGCCAAAAACAGAGGTTAGCGATTGCAAGGGCCATATTGAAGAAATCAAGGGTTCTGCTACTTGATGAAGCAAGTAGTGCCTTGGACTTGGAATCAGAGAAGCATGTCCAAGAAGCACTGAAGAATGTTACAAGAGATGCAACAACTATAATAGTGGCCCACCGTCTTTCTACGATCAGAGACGCCGATAGCATCGCGGTGGTGAGAGAAGGGACAGTAGCTGAATATGGAAGCCATGATAGTCTCCTTGCTTCCCATCCCAATGGTTTGTATGCTACCTTGATTCGTTCTGAAACTGAAGTCAATGCCTTCACTGGTTTTCGATAA 4509 0.4418 MPDSSFEFDYNSSGQHYTTRRYPSTPVSSRNTSRSFTAASSSLGNHNSGVGRRNRAPAIPINSDDDRSWQTEVSWQFEPTGWREYGSRNLGSLFTPWAEGPIQSDRSRVFRRSARDYYLSRTSGFSRGNRFAANSDSEASGYVIPSGRVELQSYVAEENGDQNSKSYSGFSRLDIIKEGIIGTRKGNNIPLAEEDELSFTSFSVGQKPELSYTTHDSYSGHGQIVPVHFSHGYSGYSHHHGIDKFSGFREDSDQEDMDYDDEDLEPPKAVGLFSFFRYSKKWDLVLVFLGCLGALIDGGSLPWYSYLFGQVVNKLSEQSRDGADKDQIMKDIVMRCIYMTVLSAVVMVGAYMEITCWRLVGERSAQRIRREYLRAVLRQDISFYDTEISTSDIMHGIASDVAQIQEVMGDKMAHFVHHLCTFITGYIVGFVRSWKVALVVLSVTPVTMFCGLAYKGIYGGLSAKEEASYRMAGSIAEQTISSIRTVFSFVAESQMAIKYYDLLQNSIPVGVRIGFAKGAGIGVIYLVTYSTWALAFWYGSILIAKGEIDGGRAIACYFGVMVGGRGLALALSYFAQFAQGIVAASRVFEIIERVPEIDPYSPEGRRLSNVRGRIEFKSVIFAYPARPDALILNSLKLVIPCSRTTALVGASGGGKSTIFALVERFYDPIEGIITLDGHDLRTLQIKWLRDQIGMVGQEPILFSTTILENVMMGKDNATKKEAIAACIAADAHNFISILPLRYDTQVGAKGTQLSGGQKQRIALARAIIKDPKILLLDEPTSALDAESESVVQQTIDKISAGRTTIVIAHRIATVKNAHTIVVLENGSVTEIGDHRQLMGKAGAYYNLVMLASEAASKPVSNSIQKVNDFSVYENSVPDITRSRSTLDISRSNLKSTRDEKQADMEGEQQKPRKFQLSEIWKLQKPEFVMLFSGFVLGMLAGAFLSIFPLILGLALEVYFKQDTSTMKTDINHLCLVLVGLGFGCIISLTGQQGLCGWAGTKLTIRIRDLLFRSILKQEPGWFDFEENSAGVLVSRLSIDCISFRSVLGDRVSVLLMGLSSAAVGLGVCFKFDYRITLLAATLTPFTLGANYLNLIINLGPRVNNDSFARASNIASGAVSNIRTTIAFSAQEQIIKSFDRALSEPRKKSVKRSQILGVMLGFFQGAMYGAYTLTLWFGALLVKQGKAQFGDVVKIFLILVLSSFSVGQLTGLAPDTSLAATAIPAVLDIIHRRPLIGNDKMKVKKLKRSELLKLEFKMVTFAYPSRPEVIVLRNFNLKVKGGSTVALVGASGSGKSTVIWLIQRFYDPNQGQVMMGGLDLRDIDVEWLRRQTALVGQEPALFAGSIRENIAFGNPEASWAEIEVAAKEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRLAIARAILKKSRVLLLDEASSALDLESEKHVQEALKNVTRDATTIIVAHRLSTIRDADSIAVVREGTVAEYGSHDSLLASHPNGLYATLIRSETEVNAFTGFR 1502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0204 1502 CDD ABC_MTABC3_MDL1_MDL2 1254 1490 - -
Lele37g0204 1502 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 1104 1244 - -
Lele37g0204 1502 CDD ABC_6TM_Pgp_ABCB1_D2_like 920 1235 - -
Lele37g0204 1502 FunFam ABC transporter B family member 1 1243 1493 - -
Lele37g0204 1502 MobiDBLite consensus disorder prediction 890 910 - -
Lele37g0204 1502 ProSitePatterns ABC transporters family signature. 753 767 IPR017871 GO:0005524|GO:0016887
Lele37g0204 1502 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 288 579 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele37g0204 1502 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 614 850 IPR003439 GO:0005524
Lele37g0204 1502 CDD ABC_MTABC3_MDL1_MDL2 614 851 - -
Lele37g0204 1502 MobiDBLite consensus disorder prediction 1 49 - -
Lele37g0204 1502 PANTHER ABC TRANSPORTER B FAMILY 255 850 - -
Lele37g0204 1502 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 933 1217 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele37g0204 1502 SUPERFAMILY ABC transporter transmembrane region 912 1233 IPR036640 GO:0005524|GO:0016020
Lele37g0204 1502 MobiDBLite consensus disorder prediction 1 67 - -
Lele37g0204 1502 MobiDBLite consensus disorder prediction 892 910 - -
Lele37g0204 1502 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1253 1489 IPR003439 GO:0005524
Lele37g0204 1502 Coils Coil 890 910 - -
Lele37g0204 1502 ProSitePatterns ABC transporters family signature. 1392 1406 IPR017871 GO:0005524|GO:0016887
Lele37g0204 1502 Pfam ABC transporter 632 781 IPR003439 GO:0005524
Lele37g0204 1502 SMART AAA_5 641 842 IPR003593 -
Lele37g0204 1502 SMART AAA_5 1280 1472 IPR003593 -
Lele37g0204 1502 SUPERFAMILY ABC transporter transmembrane region 274 599 IPR036640 GO:0005524|GO:0016020
Lele37g0204 1502 Gene3D ABC transporter type 1, transmembrane domain 336 1094 IPR036640 GO:0005524|GO:0016020
Lele37g0204 1502 Gene3D - 1251 1493 IPR027417 -
Lele37g0204 1502 Gene3D - 612 887 IPR027417 -
Lele37g0204 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 605 848 IPR027417 -
Lele37g0204 1502 Pfam ABC transporter 1271 1419 IPR003439 GO:0005524
Lele37g0204 1502 Gene3D ABC transporter type 1, transmembrane domain 1103 1249 IPR036640 GO:0005524|GO:0016020
Lele37g0204 1502 CDD ABC_6TM_Pgp_ABCB1_D1_like 288 587 - -
Lele37g0204 1502 FunFam ABC transporter B family member 1 604 852 - -
Lele37g0204 1502 Pfam ABC transporter transmembrane region 287 563 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele37g0204 1502 Pfam ABC transporter transmembrane region 931 1199 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele37g0204 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1252 1490 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0204 Lele-ChrLele37 1614224 1620751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0204 997 1492 Calmodulin-binding Proteins AT2G36910 39.558 1.90e-99 347