Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0189 ATGTGTGGAGGTGCTATTATCTCCGACTTCATCCAGACGCCAGAGGCCAGGTCCCGGCGGCTCACCGCTGATTTCCTCTGGCCGGATTCGAAGAAACCCAGATGGGGGAAGCGACTCTCCAAGCCTACCAGGTCTGCGTTCGGGGATTCGGACGATGATTTCGAAGCTGATTTTAGGGAATTCAAGGACGAGTCTGATATCGATGAGGTGGATGTGGATGATGATTTGCTGTTCAATTTCAAGAACATAGGTTTCTCTGCGGCCAAACCCCCCAAGCCTTCCAGATCTCTGTCTCATGGATCCGGTGCCGTAAACTCTATGAAATTCAATGGAAAAGCTAAAAAGTCAGAGAAAAGAAAGAGGAAGAATCTGTATAGGGGAATCCGTCAGCGCCCATGGGGAAAATGGGCAGCTGAGATCCGTGACCCAAGGAAAGGAGTCCGTGTCTGGCTTGGAACCTTCAACACTGCTGAAGAAGCAGCTAGAGCCTATGATGCTGAAGCACGTAGGATTCGTGGTAAGAAAGCCAAGGTTAACTTTCCTGATGAGGCCTCAGACTCTCCCCCAAAACATTTCAATGTAAAACACTCTGTCCAGCCTGTTATGAACCAGAAATTCAATTTTGGAAACAATCCAAAGGATTACTTCTCTCCTGTGGGTCTGATGGAGCAGAAACCACTGGTTAATCAGTATGCTAACATGGGAGTCTTACTCAGCAGTGCAGATGGGCTCACATCTTTTACACCATTGGATGATGTTAACGTCCCTGTTTGTTTCAGTTCGGATCAAGCAAGTAATTCGTTTGATTATTCTAGTATTGGCTGGGGCGAACAGGGCCCAAAGACTCCTGACATCTCTTCAATGCTTTCTGCTTCTATAGAAGATGAATGTCAAGCTGTTAATGACGCCAACCAGAATAATGACATTCCTAACTCTCAGGGTATGTTGCCTCTGGGAAATGATTCTGCAAAAACACTGTCTGAGGAACTTGCTGATATTGAATCCCAGTTTCAGTTCTTTAAGACGCCTTACCTTGAAGGGAGCTGGGACGTTGCTTCATTAGAATCCTTGCTTGGTGAAAACACAACTCAGGATGGCGAAAACCCAATGGACTTTTGGAGCTTTGATGATCTACCTTCCATGCCTGGGGGAGTTTTCTGA 1161 0.466 MCGGAIISDFIQTPEARSRRLTADFLWPDSKKPRWGKRLSKPTRSAFGDSDDDFEADFREFKDESDIDEVDVDDDLLFNFKNIGFSAAKPPKPSRSLSHGSGAVNSMKFNGKAKKSEKRKRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPDEASDSPPKHFNVKHSVQPVMNQKFNFGNNPKDYFSPVGLMEQKPLVNQYANMGVLLSSADGLTSFTPLDDVNVPVCFSSDQASNSFDYSSIGWGEQGPKTPDISSMLSASIEDECQAVNDANQNNDIPNSQGMLPLGNDSAKTLSEELADIESQFQFFKTPYLEGSWDVASLESLLGENTTQDGENPMDFWSFDDLPSMPGGVF 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0189 386 PRINTS Ethylene responsive element binding protein signature 147 163 IPR001471 GO:0003700|GO:0006355
Lele37g0189 386 PRINTS Ethylene responsive element binding protein signature 125 136 IPR001471 GO:0003700|GO:0006355
Lele37g0189 386 ProSiteProfiles AP2/ERF domain profile. 124 181 IPR001471 GO:0003700|GO:0006355
Lele37g0189 386 FunFam Ethylene-responsive transcription factor 2 123 182 - -
Lele37g0189 386 Gene3D AP2/ERF domain 124 182 IPR036955 GO:0003700|GO:0006355
Lele37g0189 386 SUPERFAMILY DNA-binding domain 124 183 IPR016177 GO:0003677
Lele37g0189 386 CDD AP2 125 182 IPR001471 GO:0003700|GO:0006355
Lele37g0189 386 SMART rav1_2 124 187 IPR001471 GO:0003700|GO:0006355
Lele37g0189 386 Pfam AP2 domain 125 173 IPR001471 GO:0003700|GO:0006355
Lele37g0189 386 MobiDBLite consensus disorder prediction 89 123 - -
Lele37g0189 386 PANTHER DNA-BINDING DOMAIN 101 260 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0189 Lele-ChrLele37 1520243 1522674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0189 1 386 AP2-EREBP Transcription Factor Family AT1G53910 45.960 1.97e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele37g0189 AP2 1.6e-12 CL0081