Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0179 ATGCATTGTGCAGCCGTAGTGGGAGAACGATTCCTAGCTCGCGACATAACCTTTGAAAACACTGCCGGCCATGCGAAGCACCAAGCCGTCGCCCTCCGGGTAGGTGCCGACTTCGCCGCCTTCTACCAGTGCGACTTCCTCGCCTTCCAAGACACCCTCTACGTCCACAACAACCGCCAGTTCTTCATCAACTGCCTCATTGCCGGCACCGTCGACTTCATCTTTGGCAACTCCGCCGCCGTGTTCCAAGACTGCGATATCCACGCCCGCCTCCCCGGCTCTGGCCAGAAGAACATGGTCACCGCACAAGGACGAGTTGACCCTAACCAGAACACCGGCATCGTTATCCAGAAGTGCCGTATCGGAGCAACACAAGACCTGGAGGCAAAGAAGAAGGACTTCAAGACCTTCCTCGGCCGGCCATGGAAACAGTATTCGAGGACGGTGATAATGCAGACCAGCATAACGGACGTGATTGATCCGGTGGGATGGCACGAGTGGAATGGGGATTTCGCTTTGGACAGTCTGTTCTACGGGGAGTATCAAAATACTGGCGCAGGCTCCGGAACGGCGAACAGAGTGACGTGGAAGGGGTTCAAGGTTATAACCAGTGCTTCGGAGGCACAGCAGTTCACTGCCGCCAACTTTATTGGTGGCTCTAACTGGTTGGGCTCCACTGGTTTTCCTTTCTCTTTGGGTCTATAG 705 0.5546 MHCAAVVGERFLARDITFENTAGHAKHQAVALRVGADFAAFYQCDFLAFQDTLYVHNNRQFFINCLIAGTVDFIFGNSAAVFQDCDIHARLPGSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATQDLEAKKKDFKTFLGRPWKQYSRTVIMQTSITDVIDPVGWHEWNGDFALDSLFYGEYQNTGAGSGTANRVTWKGFKVITSASEAQQFTAANFIGGSNWLGSTGFPFSLGL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0179 234 ProSitePatterns Pectinesterase signature 2. 67 76 IPR033131 -
Lele37g0179 234 SUPERFAMILY Pectin lyase-like 3 233 IPR011050 -
Lele37g0179 234 FunFam Pectinesterase 4 2 234 - -
Lele37g0179 234 Pfam Pectinesterase 5 219 IPR000070 GO:0030599|GO:0042545
Lele37g0179 234 PANTHER PECTINESTERASE 5 224 - -
Lele37g0179 234 Gene3D - 2 234 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0179 Lele-ChrLele37 1464062 1464766 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0179 5 234 Carbohydrate Esterase AT3G14310 76.957 8.44e-135 390