Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0178 ATGAGCAAGTTCAGGCAAGTCTTCGCCGGGATCTCAGATCCCGGCAACCAAAAGAGAAACAAAGAGCTCTTTCTTGCTCTGTTCTCCTCTCTGCTCCTCCTCGCCACCTTTGTCGGCACCGTCGCCGGAGTTAACTCCCGCCAAAAATCTTCCGATAATTTGAATTTCTCCTCCCATCCATCCCATGCCATCGTCAAATCTGCTTGCAGCCCCACACTTTACCCTGAACTTTGCTTCTCCGCTATCTCCTCCGAGCCTTCATTCACCGAGAAAGTCTCTTCCCAACGCGATGTCATCGAATTGTCGATAAACATAACGACCAGAGCCGTTGAGCATAATTTCTTCGCCGTCCAGAAGCTAATCGCCAACAGAAAGGGAAGCCTCACGAAGAGAGAGAAAACCGCTCTCCATGACTGTTTAGAGACTATCGACGAAACGCTCGACGAGCTTCACACCGCTTTGGGAGATCTGAAAATATATCCGAACAAGAAAACTCTGTACCAGCACGCTGACGATCTAAAGACTCTGATAAGCGCTGCCCTTACCAACCAGGTCACGTGCATCGACGGATTCTCTCACGACGGCGCCGATAAGAAAGTGAGAGGAGGTCTAGAGGCAGGGCAGGTACACGTGGAGCACATGTGCAGTAATGCTCTGGCGATGATTAAGAACATGACGGACACAGATGTGGCGAACTACGAGATGAAGATGGGGATTACAAAGAGCAGGAGGCTGATGTCTGCGACGTCGGAAGAAGGCGGGATTCAGTGGCCGGAGTGGATGTCGGCGGCAGACAGGCACTTGTTGCAGGCAACGGGGGTGACACCTAACGTGGTAGTAGCGGCGGACGGGAGTGGAGATTTTAAGACGGTGGCGGAGGCAGTGGCTGCGGCGCCGGAGAAGAGTAAAACGAGATATGTGATTAAGATAAAAGCAGGAGTTTACAGAGAGAATGTGGAAGTTACGAAGAAGAAGACGAATATAATGTTCTTGGGAGATGGAAGACGTAACACTATCATTACCGGAAGCAGGAATGTTGTTGATGGAAGCACCACCTTCCATTCCGCCACAGTTGGTAAGTTCCCTGCTCTTCATTTCTCATTCGCTTAG 1110 0.5063 MSKFRQVFAGISDPGNQKRNKELFLALFSSLLLLATFVGTVAGVNSRQKSSDNLNFSSHPSHAIVKSACSPTLYPELCFSAISSEPSFTEKVSSQRDVIELSINITTRAVEHNFFAVQKLIANRKGSLTKREKTALHDCLETIDETLDELHTALGDLKIYPNKKTLYQHADDLKTLISAALTNQVTCIDGFSHDGADKKVRGGLEAGQVHVEHMCSNALAMIKNMTDTDVANYEMKMGITKSRRLMSATSEEGGIQWPEWMSAADRHLLQATGVTPNVVVAADGSGDFKTVAEAVAAAPEKSKTRYVIKIKAGVYRENVEVTKKKTNIMFLGDGRRNTIITGSRNVVDGSTTFHSATVGKFPALHFSFA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0178 369 CDD PMEI-like_3 67 226 - -
Lele37g0178 369 Gene3D - 271 364 IPR012334 -
Lele37g0178 369 PANTHER PECTINESTERASE 35 359 - -
Lele37g0178 369 SMART PMEI_2 60 221 IPR006501 GO:0004857
Lele37g0178 369 Pfam Pectinesterase 277 359 IPR000070 GO:0030599|GO:0042545
Lele37g0178 369 FunFam Pectinesterase 61 226 - -
Lele37g0178 369 SUPERFAMILY Pectin lyase-like 273 358 IPR011050 -
Lele37g0178 369 TIGRFAM PME_inhib: pectinesterase inhibitor domain 51 225 IPR006501 GO:0004857
Lele37g0178 369 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 226 IPR035513 -
Lele37g0178 369 Pfam Plant invertase/pectin methylesterase inhibitor 64 221 IPR006501 GO:0004857
Lele37g0178 369 Gene3D Invertase/pectin methylesterase inhibitor family protein 61 226 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0178 Lele-ChrLele37 1460402 1461511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0178 41 358 Carbohydrate Esterase AT1G53830 64.087 1.19e-137 402