Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0169 ATGGCTGTCGAACCCGAAGACGATATCAAGGGCGAGAAGAATCCCCCTCCCCTCGACGAGGATGACATCGCGCTACTTAAAACCTATGGTTTGGGACCTTACTCCACAGGCATAAAAAAGGTGGAAAAGGAGATCAAAGAAATGGCAAAGAAAGTCAATGATTTGTGTGGAATCAAGGAGTCTGATACTGGTTTAGCTGCACCAAGCCAGTGGGATCTTGTTTCTGATAAGCAAATGATGCAGGAGGAGCTGCCTCTTCAGGTGGCAAGGTGTACAAAAATAATAAATCCAAACTCCGAAGATGCAAAATATGTCATTAATGTAAAGCAGATTGCAAAGTTTGTTGTTGGCTTGGGCGACAAAGTTTCTCCCACTGACATAGAGGAAGGAATGCGGGTTGGGGTTGATAGAAACAAATATCAGATTCAAATTCCCTTGCCTCCAAAAATTGATCCAAGTGTTACCATGATGACAGTAGAGGAGAAACCCGATGTGACGTATAATGATGTTGGTGGTTGTAAGGAGCAGATTGAAAAGATGAGAGAAGTTGTGGAACTCCCCATGCTTCACCCTGAGAAATTTGTTAAGCTTGGAATTGATCCTCCAAAAGGTGTTCTTTGTTATGGTCCTCCAGGAACTGGCAAAACCCTTTTAGCTAGGGCTGTGGCCAATAGGACAGATGCTTGTTTTATAAGAGTTATTGGAAGTGAGTTAGTTCAGAAATATGTTGGCGAGGGTGCTCGGATGGTTCGTGAACTATTTCAGATGGCCCGTTCAAAGAAGGCATGCATTGTATTTTTTGATGAAGTTGATGCTATAGGAGGTGCTAGATTTGATGATGGTGTTGGTGGGGACAATGAGGTTCAGCGAACCATGCTGGAAATTGTGAATCAGCTTGATGGTTTTGATGCTCGAGGGAACATCAAAGTTTTGATGGCAACAAACAGGCCGGACACTCTAGATCCAGCACTTTTACGTCCTGGGAGGTTGGATCGGAAAGTTGAATTTGGGCTCCCTGACCTAGAGAGCAGGACTCAAATCTTTAAAATCCACACAAGGACTATAAACTACGAAAGGGACATCCGATTCGAACTTCTAGCTCGGCTTTGTCCAAATTCCACTGGAGCTGATATAAGGAGTGTATGCACTGAAGCGGGTATGTATGCTATTCGGGCTCGAAGGAAGACTGTGACGGAGAAAGACTTCCTTGATGCAGTAAACAAAGTCATCAAAGGATACCAAAAGTTCAGTGCAACTCCAAAGTATATGGTCTACAATTAA 1281 0.4364 MAVEPEDDIKGEKNPPPLDEDDIALLKTYGLGPYSTGIKKVEKEIKEMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEELPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTINYERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0169 426 Pfam ATPase family associated with various cellular activities (AAA) 205 337 IPR003959 GO:0005524|GO:0016887
Lele37g0169 426 ProSitePatterns AAA-protein family signature. 308 326 IPR003960 GO:0005524|GO:0016887
Lele37g0169 426 TIGRFAM 26Sp45: 26S proteasome subunit P45 family 98 409 IPR005937 GO:0005737|GO:0030163|GO:0036402
Lele37g0169 426 Gene3D - 158 337 IPR027417 -
Lele37g0169 426 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 8 412 - -
Lele37g0169 426 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 416 IPR027417 -
Lele37g0169 426 CDD AAA 171 338 - -
Lele37g0169 426 MobiDBLite consensus disorder prediction 1 20 - -
Lele37g0169 426 FunFam 26S protease regulatory subunit 7 339 410 - -
Lele37g0169 426 FunFam 26S protease regulatory subunit 7 158 337 - -
Lele37g0169 426 Pfam AAA+ lid domain 360 403 IPR041569 -
Lele37g0169 426 MobiDBLite consensus disorder prediction 1 21 - -
Lele37g0169 426 FunFam 26S protease regulatory subunit 7 33 157 - -
Lele37g0169 426 Gene3D - 34 157 IPR012340 -
Lele37g0169 426 Gene3D - 339 420 - -
Lele37g0169 426 SMART AAA_5 201 340 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0169 Lele-ChrLele37 1393653 1397601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0169 153 415 Miscellaneous Gene Families AT2G29080 42.264 1.11e-56 198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0169 37 1393653 1397601 Lele37g0169 37 1393653 1397601 ECH
Lele37g0169 37 1393653 1397601 Lele39g1251 39 21059721 21063633 hybridization
Lele37g0169 37 1393653 1397601 Lele40g0171 40 1359447 1363534 hybridization