Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0167 ATGGCCCACCTCCTTCATCTTCTTCTTCTTCTTCTTCTTCCCATTCTCATTTCCTCACCTTCCTCTTCTCACTACCACACTCTGCCTCCAACCTCTTTCCCTGAGAAGAAGGAGGTCAAGGAGAATTCTTCTTCTGCTTTACTTCTCTTCTGGGGGTTCTCTTCATTTACCTCCAGAATGGCTGAGGGACTGGATAAGCCTTTGCTTGACCCTGAGAATTTCAGTCGAGAAGGTGTTGATTTGGAACGCATACCATTAGAAGAAGTTTTTGAGCAGCTAAAAACATCGCCAAGAGGACTTTCTTCTGATGATGCTGAAGCCAGACTGGTGATATTTGGCCCAAACAAGCTTGAAGAGAAGCCTGAAAATAAATTTTTGAAGTTTCTGAGTTTCATGTGGAACCCTCTATCATGGGTTATGGAAGCTGCTGCTATAATGGCAATTGCTCTTGCTAATGGTGGAGGGGAGGGTCCTGATTGGCAGGACTTTGTAGGGATTGTATGCCTTCTGGTCATAAATTCCACCATTAGTTTTATTGAAGAGAATAATGCTGGAAATGCAGCAGCTGCACTCATGGCTCGTTTAGCTCCAAAAACGAAGGTTCTGAGAGATGGCCAGTGGCAAGAGCAAGATGCATCTATTTTGGTACCTGGAGATATAATCAGCATAAAGCTGGGAGATATCGTTCCAGCTGATGCTCGCCTTCTCGAAGGTGACCCTCTAAAAATTGACCAGTCGGCTCTCACCGGAGAATCTTTGCCTGTGACAAAGAGGACAGGAGATGAAGTCTTTTCTGGGTCAACATGTAAGCATGGAGAGATTGAAGCGGTAGTCATTGCAACAGGAGTTCACACCTTTTTTGGAAAGGCAGCACACTTAGTTGATAGTACTATAGTTGTTGGACATTTTCAAAAGGTTCTTACCTCAATTGGGAACTTCTGCATTTGCTCTATAGCTGTAGGGATGGTTATTGAAATCATAGTAATGTATCCTATAGAGAAACGTTCATATAGGGATGGAATCAACAACCTTCTTGTTCTCTTAATTGGAGGAATTCCCATAGCCATGCCAACAGTGTTATCCGTGACGCTCGCGATTGGATCTCATCGGCTTTCACAGCAGGGAGCCATCACAAAGAGAATGACAGCAATTGAAGAAATGGCAGGCATGGATGTACTATGCAGTGATAAGACTGGAACTCTTACCCTGAATCGCCTTACCGTTGACCGAAACCTTATAGAGGTCTTTAACAGCAATATGGAAAAAGATATGGTTGTCCTTCTAGCAGCCAGAGCAGCTAGGTTGGAAAATCAGGACGCCATTGATGCCGCCATCGTTAATATGCTAGCTGATCCGAGGGAGGCACGTGCAAACATCACTGAAGTTCATTTTCTACCTTTCAATCCAGTAGACAAACGTACAGCTATTACATATTATGATTCTGAAGGCAATTGGTATAGGGCCAGCAAAGGAGCTCCTGAACAGATTCTAAATATGTGCCAAGAGAAAGATGAGATTGCCGGAAAAGTTCATACCATCATCGACAAATACGCTGAAAGGGGCCTGCGATCTCTTGCAGTTGCTTTGCAGGAAGTTCCTGAGAAGTCCAAGGAGAGTCCCGGAGGCCCTTGGACTTTTTGTGGGCTGCTGCCCTTATTTGATCCTCCAAGGCATGATAGTGCTGAGACTATACGTAGAGCACTTAACCTCGGAGTCAATGTTAAGATGATTACAGGGGATCAGCTGGCAATTGCAAAAGAGACAGGCCGAAGACTTGGTATGGGGACAAATATGTATCCTTCTTCTTCATTGTTAGGCCGTCACAAAGATGAAAGTGAAGCTCTCCCAGTAGACGAGCTCATTGAAAAGGCAGACGGCTTTGCTGGTGTATTTCCTGAACACAAGTATGAAATTGTGAAAATTTTACAAGAAAAGAAGCACGTAGTTGGAATGACTGGAGATGGTGTAAATGATGCACCGGCTTTAAAGAAAGCTGACATTGGGATTGCTGTGTCAGATGCAACTGATGCTGCAAGAGGTGCTGCTGATATAGTCTTAACTGAGCCCGGCTTAAGTGTTATTGTCAGTGCTGTGTTAACTAGCCGAGCTATATTTCAAAGAATGAAGAATTATACAATATATGCAGTCTCCATAACCATTCGTATAGTGCTTGGTTTTATGCTTCTGGCATTGATTTGGGAGTATGACTTTCCACCTTTCATGGTCCTGATCATCGCCATACTGAATGATGGGACCATTATGACAATATCAAAAGATCGCGTAAAACCATCACCGACTCCAGACAGTTGGAAGCTGCCAGAGATATTTGCAACTGGAATAGTTATTGGCACTTACCTTGCTTTCATCACTGTTCTGTTCTACTGGGCAGTAGTGGATACCACTTTCTTTGAGACTCACTTCCATGTAACCTCCTTATCCAGTGACAGTGAGAAAGTTTCATCCGCTGTGTATCTTCAAGTCAGTATCATCAGCCAGGCTTTGATTTTTGTAACACGAAGTCAAGGATGGTCATACCTAGAGAGACCTGGAGTTCTCTTGATGTGTGCCTTTGTTGTAGCTCAACTGGTGGCCACCTTGATGGCTGTGTATGCGCATATCAGCTTTGCTAAAATTACAGGCATTGGATGGGGATGGGCTGGTGTTATATGGTTATACAGCTTGATCTTCTATGTACCTTTGGACATAATCAAGTTCACAATTCGCTATATTTTGAGTGGCCAAGCCTGGAATCTGGTATTTGACAGAAAGACTGCTTTTAGTTCTAAGAAAGACTATGGAAAAGAAGATAGGGCCGCAAAATGGATTGTTTCTCAGAGAAGCTTACAAGGATTGTGGGGCGCAGACTTAGAGGTGAAGAATGGAATCGGAAGACGATCTTCTTCTTTGATTGCCGAACAAGCAAGAAGACGTGCTGAAATCGCAAGGCTGGGAGAATTACACACTTTGAGAGGACATGTGGAGTCTGTTTTGAGACTCAAGAACTTGGACCGAAGTGTTCTTCAATCAGCATACACAGTTTGA 3042 0.4366 MAHLLHLLLLLLLPILISSPSSSHYHTLPPTSFPEKKEVKENSSSALLLFWGFSSFTSRMAEGLDKPLLDPENFSREGVDLERIPLEEVFEQLKTSPRGLSSDDAEARLVIFGPNKLEEKPENKFLKFLSFMWNPLSWVMEAAAIMAIALANGGGEGPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMARLAPKTKVLRDGQWQEQDASILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKRTGDEVFSGSTCKHGEIEAVVIATGVHTFFGKAAHLVDSTIVVGHFQKVLTSIGNFCICSIAVGMVIEIIVMYPIEKRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNSNMEKDMVVLLAARAARLENQDAIDAAIVNMLADPREARANITEVHFLPFNPVDKRTAITYYDSEGNWYRASKGAPEQILNMCQEKDEIAGKVHTIIDKYAERGLRSLAVALQEVPEKSKESPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGRHKDESEALPVDELIEKADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVSDATDAARGAADIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLPEIFATGIVIGTYLAFITVLFYWAVVDTTFFETHFHVTSLSSDSEKVSSAVYLQVSIISQALIFVTRSQGWSYLERPGVLLMCAFVVAQLVATLMAVYAHISFAKITGIGWGWAGVIWLYSLIFYVPLDIIKFTIRYILSGQAWNLVFDRKTAFSSKKDYGKEDRAAKWIVSQRSLQGLWGADLEVKNGIGRRSSSLIAEQARRRAEIARLGELHTLRGHVESVLRLKNLDRSVLQSAYTV 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0167 1013 Gene3D - 197 281 - -
Lele37g0167 1013 SMART Cation_ATPase_N_a_2 80 152 IPR004014 -
Lele37g0167 1013 Pfam haloacid dehalogenase-like hydrolase 390 666 - -
Lele37g0167 1013 SUPERFAMILY HAD-like 390 699 IPR036412 -
Lele37g0167 1013 SUPERFAMILY Calcium ATPase, transduction domain A 197 294 IPR008250 -
Lele37g0167 1013 FunFam ATPase 4 plasma membrane-type 643 879 - -
Lele37g0167 1013 Pfam Cation transporter/ATPase, N-terminus 84 146 IPR004014 -
Lele37g0167 1013 SFLD p-type atpase 376 704 IPR044492 -
Lele37g0167 1013 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 99 870 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lele37g0167 1013 FunFam Plasma membrane ATPase 546 700 - -
Lele37g0167 1013 Pfam E1-E2 ATPase 195 373 - -
Lele37g0167 1013 CDD P-type_ATPase_H 99 905 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lele37g0167 1013 ProSitePatterns E1-E2 ATPases phosphorylation site. 396 402 IPR018303 -
Lele37g0167 1013 Gene3D - 159 879 - -
Lele37g0167 1013 PRINTS P-type cation-transporting ATPase superfamily signature 652 671 - -
Lele37g0167 1013 PRINTS P-type cation-transporting ATPase superfamily signature 675 687 - -
Lele37g0167 1013 PRINTS P-type cation-transporting ATPase superfamily signature 570 580 - -
Lele37g0167 1013 PRINTS P-type cation-transporting ATPase superfamily signature 394 408 - -
Lele37g0167 1013 PRINTS P-type cation-transporting ATPase superfamily signature 244 258 - -
Lele37g0167 1013 PRINTS P-type cation-transporting ATPase superfamily signature 548 559 - -
Lele37g0167 1013 SUPERFAMILY Calcium ATPase, transmembrane domain M 80 911 IPR023298 -
Lele37g0167 1013 SFLD C1.7: P-type atpase like 376 704 - -
Lele37g0167 1013 Gene3D - 391 689 IPR023214 -
Lele37g0167 1013 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 166 426 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele37g0167 1013 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 627 733 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele37g0167 1013 Gene3D - 406 553 IPR023299 GO:0000166
Lele37g0167 1013 PANTHER CALCIUM-TRANSPORTING ATPASE 83 946 - -
Lele37g0167 1013 FunFam Plasma membrane ATPase 197 281 - -
Lele37g0167 1013 FunFam Plasma membrane ATPase 406 553 - -
Lele37g0167 1013 Gene3D - 965 1013 - -
Lele37g0167 1013 PRINTS H+-transporting ATPase (proton pump) signature 824 845 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele37g0167 1013 PRINTS H+-transporting ATPase (proton pump) signature 652 668 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele37g0167 1013 PRINTS H+-transporting ATPase (proton pump) signature 683 708 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele37g0167 1013 PRINTS H+-transporting ATPase (proton pump) signature 624 640 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele37g0167 1013 PRINTS H+-transporting ATPase (proton pump) signature 510 528 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0167 Lele-ChrLele37 1373839 1381259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0167 60 1013 Primary Pumps ATPases AT1G17260 79.874 0.0 1528