Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0162 ATGGTGGAGCCAGCTCCTATGTATCAAGATATGCCTAAGGGCTTCAGATTCTGTCCGACCGATGAAGAGCTCGTCGGTCACTACCTCTGTCACAAACTGTTGGCCGATGATCCCTCCATCCACCACACCATCCCTGAGATTCACGTCTGCAACTACGAACCCTGGGAATTACCAGGACGCGCCCCCGGCGTTAAAACTAATTGGGTTATTCATGAATATCACGATGCCCTCTTTCCTCCAAATCAGAGAACCTTTGTTCTATGTAGGTTACTAAAGAAGCCTGATGATAAGAAAACAAAAGGAAAATCCAATGAACCTGTTTATTATGAGAGCGAGCCAAGCAACAATATCGCTTTTGAGTATGAAAATCAAGCAAATTTGTTTATGGTTTCCGAAGTACAAAACTACTATTTGTCAGATATGGGTTCAACAATGAGTCAAACGCCTTCGGAGTCCAATGAATTTGTAGGCTCATCAGTGGCTCCTGAAGTGAATTCATTTGATGAGTCAGAATCAGAAGAATTTGATTTCAGATCATTCTTGAGGTCGTCTCCAAGTGAGGATGAGGAAGACTAG 576 0.4323 MVEPAPMYQDMPKGFRFCPTDEELVGHYLCHKLLADDPSIHHTIPEIHVCNYEPWELPGRAPGVKTNWVIHEYHDALFPPNQRTFVLCRLLKKPDDKKTKGKSNEPVYYESEPSNNIAFEYENQANLFMVSEVQNYYLSDMGSTMSQTPSESNEFVGSSVAPEVNSFDESESEEFDFRSFLRSSPSEDEED 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0162 191 Pfam No apical meristem (NAM) protein 12 61 IPR003441 GO:0003677|GO:0006355
Lele37g0162 191 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 61 - -
Lele37g0162 191 MobiDBLite consensus disorder prediction 142 191 - -
Lele37g0162 191 MobiDBLite consensus disorder prediction 171 185 - -
Lele37g0162 191 ProSiteProfiles NAC domain profile. 11 182 IPR003441 GO:0003677|GO:0006355
Lele37g0162 191 Gene3D NAC domain 20 63 IPR036093 GO:0003677|GO:0006355
Lele37g0162 191 MobiDBLite consensus disorder prediction 142 166 - -
Lele37g0162 191 SUPERFAMILY NAC domain 6 93 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0162 Lele-ChrLele37 1334289 1335415 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0162 9 84 NAC Transcription Factor Family AT5G53950 43.421 3.58e-13 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele37g0162 NAM 4.4e-11 No_clan