Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0161 ATGGCGGATCCAGCTCCGACGCGGAGACGTGCGCCTGTAGGATACAGATTCCGGCCGACCGAGGAAGAGCTCGTCGCTCACTACCTCAGCCACAAATTGATGGCCGATGATCCTTCCATTTATACCACCATCCCTGAGATTGACGTTTGCAAGCACGAACCCTGGGATTTACTAGCTCTGGCTGCTTCAGCGTTTCCGGAGATCGATCCAGATGACTCAGAATGCTATTTCTTTAGTCCTCGTGATTACAAGTATACTAACAGTACTCGGTGTAACAGGACAACATCCCTGGGCTACTGGAAAGTCACCGGTAGAGACAGAAAAATCAGGGATCGAGACACCAACAATGTTATTGGGACTAAGAAAAATTTAGTTTTCTACAAGGGACGTTCTCCTCGTGGAATCAAGTATAATTGGGTTATTTATGAATATGATAATATTATGATTCCTCCACTACAGAGGACTTACGTTTTATGTAGATTAATGAAGAAGTATGAGAAGAAAATAAAAGGAAAAATTATTGTTCGTGATGATGGATTAATTCATGATGAAAAGGATTTCAATAATCATGTGAATTTTGAGCATGAAAATCAAGCAAATGTTCATGTTGGATCAAAGGAATCCTATCCATCCAATATAGATTCAATGGTTTCAACATCTTCTCTACCAAATGAACTTATAAACTCAAGTCTTGAAATATTTTACCATTCAAATGAACCTATAAACTCAAGTCTTGAAACCTCTTACCATCTAAATGAATTTATAAATTCAAATATTGAAACTTCTTACCGTCCAAATGAACCTATAAACTCAAGTCTTGAAATTTTTTACCATTCAGATGAAGCTATAAACTCAAGTCTTGAATCTTCTTACTATCTAAATGAAACTATAAACTCAATTCAAACACAATCTCAATCAAATGAAGTTATAGACTCAACTATTCAAGCACTCTTTCAGCCAAATGGAGTTATATCACAAGAATTAAATTCAACCATGGAAGCACCATTTGGTTTTGATTCGGAAGAATTCTACAATAGCTTACTCTTGCTGCTGGTTCCAACCACGGATGAGCAAGGTTTAGGGGAAATGGTGGCCCCATCTTATATGTTGGATTGA 1116 0.3772 MADPAPTRRRAPVGYRFRPTEEELVAHYLSHKLMADDPSIYTTIPEIDVCKHEPWDLLALAASAFPEIDPDDSECYFFSPRDYKYTNSTRCNRTTSLGYWKVTGRDRKIRDRDTNNVIGTKKNLVFYKGRSPRGIKYNWVIYEYDNIMIPPLQRTYVLCRLMKKYEKKIKGKIIVRDDGLIHDEKDFNNHVNFEHENQANVHVGSKESYPSNIDSMVSTSSLPNELINSSLEIFYHSNEPINSSLETSYHLNEFINSNIETSYRPNEPINSSLEIFYHSDEAINSSLESSYYLNETINSIQTQSQSNEVIDSTIQALFQPNGVISQELNSTMEAPFGFDSEEFYNSLLLLLVPTTDEQGLGEMVAPSYMLD 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0161 371 Pfam No apical meristem (NAM) protein 12 145 IPR003441 GO:0003677|GO:0006355
Lele37g0161 371 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 265 - -
Lele37g0161 371 Gene3D NAC domain 20 169 IPR036093 GO:0003677|GO:0006355
Lele37g0161 371 SUPERFAMILY NAC domain 8 164 IPR036093 GO:0003677|GO:0006355
Lele37g0161 371 ProSiteProfiles NAC domain profile. 11 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0161 Lele-ChrLele37 1329412 1331123 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0161 12 171 NAC Transcription Factor Family AT4G35580 49.697 2.00e-46 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele37g0161 NAM 6e-28 No_clan