Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0159 ATGGCGGATCCAGCTCCGACGCGGAGACGTGCGCCTGTAGGATACAGATTCCGGCCGACCGAGGAAGAGCTCGTCGCTCACTACCTCCGCCACAAATTGATGGCCGATGATCCTTCCATTTATAACACCATCCCTGAGATTGACGTTTGCAAGCACGAACCCTGGGATTTACTAGCTCTGGCTGCTTCAGCGTTTCCGGAGATCGATCCAGATGACTCAGAATGCTATTTCTTTAGTCCTCGTGATTACAAGTACACTAACAGTACTCGGTGTAACAGGACAACATCCCTGGGCTACTGGAAAGTCACCGGTAGGGACAGAAAACTCAGGGATCGAGACACCAACAATGTTATTGGGACTAAGAAAAATTTAGTTTTCTACAAGGGACGTTCTCCTCGTGGAATCAAGTATAATTGGGTTATTTATGAATATGATAATATTATGATTGCTCCCTGCAGATTGATGAAGAAATATGAGAAGAAAATAAAAGGAAAAATTATTGATTGTGATGATGGATTAATTCATGATGAAAAGGATTCAAATATTCATGTGGATTTTGAGCATGAAAATCAAGCAAATATTTATGTTGAATCAAAGCCAAATGGAGTTATATCACAAGAATTTAATTCAACCATGGAAGCACCATTTGGTTTTGATTCGGAAGAATTCTACAACAGCTTACTCTTGCTGCCGGCTCCAGCCACGGATGAGCAAGGGTTAGGGGAAACGGTGGCCCCATCTTATATGTTGTATTGA 756 0.4246 MADPAPTRRRAPVGYRFRPTEEELVAHYLRHKLMADDPSIYNTIPEIDVCKHEPWDLLALAASAFPEIDPDDSECYFFSPRDYKYTNSTRCNRTTSLGYWKVTGRDRKLRDRDTNNVIGTKKNLVFYKGRSPRGIKYNWVIYEYDNIMIAPCRLMKKYEKKIKGKIIDCDDGLIHDEKDSNIHVDFEHENQANIYVESKPNGVISQEFNSTMEAPFGFDSEEFYNSLLLLPAPATDEQGLGETVAPSYMLY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0159 251 Pfam No apical meristem (NAM) protein 12 145 IPR003441 GO:0003677|GO:0006355
Lele37g0159 251 ProSiteProfiles NAC domain profile. 11 161 IPR003441 GO:0003677|GO:0006355
Lele37g0159 251 Gene3D NAC domain 20 166 IPR036093 GO:0003677|GO:0006355
Lele37g0159 251 SUPERFAMILY NAC domain 8 145 IPR036093 GO:0003677|GO:0006355
Lele37g0159 251 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0159 Lele-ChrLele37 1313534 1315322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0159 12 164 NAC Transcription Factor Family AT4G35580 46.667 1.84e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele37g0159 NAM 6.3e-29 No_clan