Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0155 ATGGATTTCGGGGGGCCCAACCAGGCGCGCCTGATCGGAGATTACATACTGGGACCGCAAATCGGGTCGGGTTCTTTCGCGGTGGTGTGGCACTCAAGGCATCGTCACTCGGGTTTGGAGGTTGCGGTTAAGGAGATTGACAAGAAACAGCTCAGCCCAAAAGTCAGTGAGAATCTGCTTAAAGAGATTTCTATTCTTAGCACCATCAATCATCCAAACATCATACGATTGTTCGAAGCAATCCAGACCAATGATAGGATTTACCTTATTTTGGAGTATTGTAATGGGGGTGACCTTGCTACTTACATTCATCGACGCGGAAAAGTTTCAGAATCCATTGCGCGGCATTTTATGAGACACTTGGCTGCGGGGTTGATGGTACTCCAAGAAAAGCACCTCATTCATAGAGATCTAAAACCACAGAACTTACTATTGTCTGGTGCTGGAGGTATACCACTTCTAAAAATAGGCGATTTTGGTTTTGCAAGGTCTCTCACACCCCAAGGGTTGGCAGACACGCTTTGTGGCTCACCATTGTACATGGCTCCAGAGATAATTCAAAATCAGAAGTATGATGCCAAGGCTGATTTATGGAGCGTTGGAGCCATATTGTTCCAGCTAGTGACTGGGAGGCCACCATTTGATGGAAATAGTCAATTGCAGCTTTTTCAGAACATTTTAACTTCCACTGAGCTGCGGTTCCCACAAGAGGCTTTAAATGAGCTACATACAGACTGTTTAGATCTTTGCAGAAGCCTCTTACGTCTAGACCCAGTTGAGCGATTGACATTCAAAGAGTTCTTCGATCACAATTTCCTGAAGGAGCCCAGGTCAATTGTGAATGTTGAACGGTCTTCTATACAGCCACCAGAAAGATCAACGGTCCAGCAATATGGTAGTATCTCAACATCTGACAAAAGGCCTCATTTGCATTCTGGCCATCATCTTGAGACATCAGTAGATGACCCAGTAGTAATCAGTTCTGCTGTCAATGAGACCGTGCTGTTACAAAGCAAGCATAGTGGGAATGCTGCTGACACCAAGAGTGCTAAGGGCATAACTTCAACAACTACTCGTGACAAGCAGGAACTTGGTACTGTTGCACCATTGTCAGACCAGCCTCATGCTTCTCATTTGGTGGAGTCCATTGAGAAAGACTATGTCGTAGTCAATCCTCACTTTGCATCATTGGAGGCTTTCTCTGATTACTTTGAGGCGTCTGTGCAAGATAATATCACAAGCAGGGTTTCTATCTGTCCTTCAACGAGGGTTGACCTTGAAGTTGGAGTTGTAAAGGAAACGAAGGATTTAGCCTCTTGCTATGTTGATGGAGAAGAAAGCACAAAAAGATTGTATCTAGAATCATTTGCAGTCGAACTGGTGGTTTTGGCTATATGGAAAAAAGCTCTTGAAATTTGTAATGGAAGCACTTCAGGGAAGGAATCCACAACCTCATGCGGAGATGATAGCATATCACAACCCATGCTAGAGAAAATAGATTTTAGTGATCCTTCCGCTGTGTCCTTGTGGGCCAAGAAAGGATTTATTTTTGCAGTTGATCATGCTGAGAAACTTTCATGCCTTATTCAGAATATGGATGGTAGGACTGCCTTTCTTGTTCTGACTTTACTTCTTTTGGAGGAAATTTTTTCTGCACTATGTACTAAGAATATAAAATATATTGCAGGTGCAGCTGAGATGCCAGATGCAATGGAGATCCTATTTCAAAAAGCACTATCAATCGGCACAAGTGGTGCTGTAGACGAGTATATGGAAAATAGAGTTAAGGCAGCTGTATCATACTCAAAAGCGATGCTTCTACTATCATTCATTGTGAACGAAGCAGTTCACCTTCCTCTGAACCCGCCATTCTCACTAACTCCTGCTAATAAGAAGAGAATTTTAGAGTATATTTTCAACCTGCGGTCGCATCAACTTCAGTCTTCTTCATCAGAGCCTTCTAAGGCATCCAACATTCTTTCATGA 1986 0.4325 MDFGGPNQARLIGDYILGPQIGSGSFAVVWHSRHRHSGLEVAVKEIDKKQLSPKVSENLLKEISILSTINHPNIIRLFEAIQTNDRIYLILEYCNGGDLATYIHRRGKVSESIARHFMRHLAAGLMVLQEKHLIHRDLKPQNLLLSGAGGIPLLKIGDFGFARSLTPQGLADTLCGSPLYMAPEIIQNQKYDAKADLWSVGAILFQLVTGRPPFDGNSQLQLFQNILTSTELRFPQEALNELHTDCLDLCRSLLRLDPVERLTFKEFFDHNFLKEPRSIVNVERSSIQPPERSTVQQYGSISTSDKRPHLHSGHHLETSVDDPVVISSAVNETVLLQSKHSGNAADTKSAKGITSTTTRDKQELGTVAPLSDQPHASHLVESIEKDYVVVNPHFASLEAFSDYFEASVQDNITSRVSICPSTRVDLEVGVVKETKDLASCYVDGEESTKRLYLESFAVELVVLAIWKKALEICNGSTSGKESTTSCGDDSISQPMLEKIDFSDPSAVSLWAKKGFIFAVDHAEKLSCLIQNMDGRTAFLVLTLLLLEEIFSALCTKNIKYIAGAAEMPDAMEILFQKALSIGTSGAVDEYMENRVKAAVSYSKAMLLLSFIVNEAVHLPLNPPFSLTPANKKRILEYIFNLRSHQLQSSSSEPSKASNILS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0155 661 SMART serkin_6 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0155 661 SUPERFAMILY Protein kinase-like (PK-like) 11 314 IPR011009 -
Lele37g0155 661 Pfam Protein kinase domain 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0155 661 FunFam Serine/threonine-protein kinase ATG1 7 316 - -
Lele37g0155 661 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 9 477 IPR045269 GO:0004674|GO:0006914
Lele37g0155 661 MobiDBLite consensus disorder prediction 337 362 - -
Lele37g0155 661 MobiDBLite consensus disorder prediction 284 318 - -
Lele37g0155 661 CDD STKc_ATG1_ULK_like 21 272 - -
Lele37g0155 661 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lele37g0155 661 Gene3D Transferase(Phosphotransferase) domain 1 6 355 - -
Lele37g0155 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Lele37g0155 661 MobiDBLite consensus disorder prediction 284 306 - -
Lele37g0155 661 FunFam Non-specific serine/threonine protein kinase 4 95 - -
Lele37g0155 661 ProSiteProfiles Protein kinase domain profile. 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0155 Lele-ChrLele37 1258840 1264183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0155 5 276 CBL-interacting serine-threonine protein kinases AT2G30360 37.410 6.23e-55 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Lele37g0155 Pkinase 5.1e-72 CL0016