Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0149 ATGCAATGCAAAGGAGGCTTAGCTACTTACTTTTCCATGTACTTGCACATCCCATGTGCTGCGTCAATTTACGAGTGGGGTCTCAAGAGCAGGTTCTCATTGATGATGGAGAGGATTCAAGGGCCCATTAATTCCTGTTTCTTTGGTGCGCATTTGGAAGTAAATTGTTTCGAGCAAGGCTTCATCAACACAGAGGATGAGGAACGGGTTTATATATCGAGCTTAGAGGATGAAAAGATGCCATTTCTGCAGATGTTGCAGAGTGCGGAATCTTCACAACAGTTTTTCCCATTCGCTGAGGCAAATTTTCAAACACTTTTGAGGCTACAGCATATGAAGAAACAACAACCACAACCATGGGAAGAAGAAGCTCGCATACCCAGATTGCAGACCCAAATCCAAGCTAAAGAACTTGAAAGCTGTGTCACACACGACGCTGTCGAGATACACTCGCCGGTGAAATCCGAAACCAACGAAGAATCTCATCTTCTTCTTCTTCCTCGTTCAGCCACAATGGTTCACAAAGAACCCACCAATGTTCAAGCTGAAAATTCTTGCAGAGACCCCAAACGGAGAAAGCGAAAGAGAATGAGACCAATCAAGAACAAGGAAGAAGTGGAGAACCAGAGAATTACCCACATTGCCGTCGAAAGGAACCGGCGACGCCAGATGAACGACCACCTCAGTGTTCTAAGGACCCTCATGCCTCCTTCCTATATTCAAAGGGGTGACCAAGCGTCCATCATCGGAGGTGCCATTGATTTCGTGAAGGAATTGGAACAACTACTTCAAACTCTCGAGGCACAGAAGAGGATTAGAAAGAACGAAGAGATTGGATCATCTTCTTATGGGGAGACTGTGAAAGCATCATCACTGAGCTACGAAGAAGGAGTAGAGTGTGGTGGGGAAGAAGAAGAGGTGAAGGAAGCAGAGATCATAGAGGTGATGCTGATTCAGACGCATGTGAACTTGAAGATTCGATGCAGAAAAAGACAGGGGCAATTGGTGAGAGCCATTGTTGAGTTGGAAGATCTTAGGCTCAGCGTTCTGCATCTCAACATCACCTCGTCGCTGGGATCGGTACTTTACTGCTTCAATCTCAAGATTGAAGATGAGTGTAAGGTAGGGTCGGCGAATGAAATAGCAGAAGCGGTTCGTGATATATTCAGAGCGATGGATAATTAA 1185 0.4549 MQCKGGLATYFSMYLHIPCAASIYEWGLKSRFSLMMERIQGPINSCFFGAHLEVNCFEQGFINTEDEERVYISSLEDEKMPFLQMLQSAESSQQFFPFAEANFQTLLRLQHMKKQQPQPWEEEARIPRLQTQIQAKELESCVTHDAVEIHSPVKSETNEESHLLLLPRSATMVHKEPTNVQAENSCRDPKRRKRKRMRPIKNKEEVENQRITHIAVERNRRRQMNDHLSVLRTLMPPSYIQRGDQASIIGGAIDFVKELEQLLQTLEAQKRIRKNEEIGSSSYGETVKASSLSYEEGVECGGEEEEVKEAEIIEVMLIQTHVNLKIRCRKRQGQLVRAIVELEDLRLSVLHLNITSSLGSVLYCFNLKIEDECKVGSANEIAEAVRDIFRAMDN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0149 394 Gene3D - 199 276 IPR036638 GO:0046983
Lele37g0149 394 MobiDBLite consensus disorder prediction 177 197 - -
Lele37g0149 394 SMART finulus 214 265 IPR011598 GO:0046983
Lele37g0149 394 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 208 275 IPR036638 GO:0046983
Lele37g0149 394 Pfam Helix-loop-helix DNA-binding domain 209 260 IPR011598 GO:0046983
Lele37g0149 394 CDD bHLH_AtFAMA_like 211 282 - -
Lele37g0149 394 PANTHER MAX DIMERIZATION, MAD 142 390 - -
Lele37g0149 394 Coils Coil 256 276 - -
Lele37g0149 394 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 208 259 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0149 Lele-ChrLele37 1202670 1206293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0149 85 389 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46810 40.230 2.63e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele37g0149 HLH 5.3e-10 No_clan