Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0146 ATGGAGGTCTGGTTGGAGACAGAGGAGGACCAGAGCAAGAAGATGGTTCGCTGGGAGAAGTTTTTACCTCGGATGGTGCTTCGAGTATTACTTGTGGAAGCGGATGATTCTACTCGTCATGTTATCGCGGCCCTTCTCAGTAAATGCAGTTACAAAGTTGCTGCAGTTCCTGATGGGCTGAAGGCATGGGAGATGCTGAAGCGGAGGGCTTCCGAAATAGATCTCATATTAACCGAAGTGGAGTTGCCATCAATATCGGGATTAGCACTTCTTACTTTGATCATGGAACATGATATGTGCAAGAACATTCCTGTCATAATGATGTCTACTCAGGATTCAGTTAGTTTGGCAATGAAATGCATTTTGAAAGGTGCGGCTGATTTTCTCATAAAACCTGTTCGGAGGAATGAGCTGAGGAACTTGTGGCAACATGTATGGAGAAGACATGAGAAAAACCTGGAAACTACTTCTGAAAACAATGCTGCCAGCAATCATTCTAGTGGATCCGTGGCTTCCACACAGAAAAATAATGGACGCCCTGAGAAAGGGAGTGAGGCCCAAAGCACTTGTACCTCGCCATTTTTGGAAGCTGAGAGTGCATACATGCAAAATATGCAGGGTGCATCCCATATGAAGAGTTCTTCAAATTTGAGCAACATTGACACGGTGCAGAATGAAGACTCAACCATATTGAGATTGGAAAAGCAATCAGTTAAGCATAAAAATGAAACTGGAGATAAGTCACGAGCATTGTTATCGCCGGCTGCAAAGTGTGACAAGAATTTTAAAGCAACAGATTTTGGGCAGGATCAAGGACATGATTGTGCTGAAAAGGAGAATCAAGTTGAAGTTCTTAGAGCAGAGTCAAGCAGAGAAAATCCTAACATGGATACAGAGATTCTTGGATGCAACAATGAACTGGTAGAACCCTCTAGAAGAGTTATTGATTTGATTGCCACATTCAAGCATCTACCTGTAAAGAATGATGAAAGTTGTAATCTCAGCTGTTGTGGTGCAAAGAAGTTTGATATTGATCCACGATTGGAGCTTTCTCTAAGGCGAGATTTTCATGGCAGCTCATCTAAACAAACAATTGATGAAAAGCAGGCCCTGAATCATTCAAAGGCTTCAGCCTTTTCTTGGTATAGCGTGGTTAAGTTTCCATCACCATCTGGAAGCTCCGCTAAAGCAGGTGGCCACAATGGGAATTCTCATGAAGCCAGTAAATCATCTAGAACTACCGTTGATACTTCCTGTCAATATGGTGGCACGAATCATAGTTCAGAGAATATGGCGACCCTTGCCATTGGCCAATCTGGTCAAGTTGAAATACAGTCGACAAACAGTCAACTTGGACCATTTCCTGCTACTGGTGTTGCTTCTGATAACAAGCCTACTGAATCCGAAAATGTTTTTCCATCTATGTTCTTCACACAATCTGATGTTCATTCCAGACGGAGTCCTAAACCTAACTGCCTGAAAGAGAGTTCTTCTCCCATTCTCACAAGTAACTCTGTCCAGTCCAATCCTGAAAGTTACAATTCGGAACAACGTTTTCACTGTTCTGATGATGCCACCTATACTTCTTGTGATAAAAATGCAAATGAAAAAAGCAATTTGGATCCTGCAAGGCAACATTCTTCTGCTGTTGATCAGAACACCAGCAATGCCTCATGCCATGGCACTGCAAATCAGAAGAACAATAACGATGGTAATAATACAAGAGCATATAAACTCGCATGCAAAATTGATGGAAATGCTTCTTCAGCTTCAGTAGTTGAGAGCAACCCTGAAAATTATGGGGACAGCGGCCATCATAATAATGATGGATATGGAGGGACATATTCTCATTGTCCCAGCCCCAGAGAAGCTGCTATAACAAAATTTCGGATGAAGCGGAAAGAGAGGTGCTATGAGAAGAAGGTCCGATATCTAAGCAGAAAAAAACTAGCAGAGCAGCGTCCTCGGGTTAAAGGGCAGTTTGTACGCCAAGCGCATAATAACGATCATCCTCCTGCTGATGTTGATGGCGGTTCCTGA 2040 0.4279 MEVWLETEEDQSKKMVRWEKFLPRMVLRVLLVEADDSTRHVIAALLSKCSYKVAAVPDGLKAWEMLKRRASEIDLILTEVELPSISGLALLTLIMEHDMCKNIPVIMMSTQDSVSLAMKCILKGAADFLIKPVRRNELRNLWQHVWRRHEKNLETTSENNAASNHSSGSVASTQKNNGRPEKGSEAQSTCTSPFLEAESAYMQNMQGASHMKSSSNLSNIDTVQNEDSTILRLEKQSVKHKNETGDKSRALLSPAAKCDKNFKATDFGQDQGHDCAEKENQVEVLRAESSRENPNMDTEILGCNNELVEPSRRVIDLIATFKHLPVKNDESCNLSCCGAKKFDIDPRLELSLRRDFHGSSSKQTIDEKQALNHSKASAFSWYSVVKFPSPSGSSAKAGGHNGNSHEASKSSRTTVDTSCQYGGTNHSSENMATLAIGQSGQVEIQSTNSQLGPFPATGVASDNKPTESENVFPSMFFTQSDVHSRRSPKPNCLKESSSPILTSNSVQSNPESYNSEQRFHCSDDATYTSCDKNANEKSNLDPARQHSSAVDQNTSNASCHGTANQKNNNDGNNTRAYKLACKIDGNASSASVVESNPENYGDSGHHNNDGYGGTYSHCPSPREAAITKFRMKRKERCYEKKVRYLSRKKLAEQRPRVKGQFVRQAHNNDHPPADVDGGS 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0146 679 PANTHER TWO-COMPONENT RESPONSE REGULATOR 27 368 IPR045279 GO:0009736
Lele37g0146 679 Pfam Response regulator receiver domain 29 140 IPR001789 GO:0000160
Lele37g0146 679 MobiDBLite consensus disorder prediction 651 679 - -
Lele37g0146 679 ProSiteProfiles CCT domain profile. 622 664 IPR010402 GO:0005515
Lele37g0146 679 SUPERFAMILY CheY-like 27 156 IPR011006 -
Lele37g0146 679 ProSiteProfiles Response regulatory domain profile. 28 146 IPR001789 GO:0000160
Lele37g0146 679 Pfam CCT motif 622 664 IPR010402 GO:0005515
Lele37g0146 679 MobiDBLite consensus disorder prediction 532 572 - -
Lele37g0146 679 MobiDBLite consensus disorder prediction 392 426 - -
Lele37g0146 679 MobiDBLite consensus disorder prediction 156 190 - -
Lele37g0146 679 MobiDBLite consensus disorder prediction 479 516 - -
Lele37g0146 679 MobiDBLite consensus disorder prediction 448 467 - -
Lele37g0146 679 MobiDBLite consensus disorder prediction 591 614 - -
Lele37g0146 679 Gene3D - 25 254 - -
Lele37g0146 679 MobiDBLite consensus disorder prediction 591 619 - -
Lele37g0146 679 MobiDBLite consensus disorder prediction 154 190 - -
Lele37g0146 679 SMART REC_2 27 142 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0146 Lele-ChrLele37 1186093 1190069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0146 607 671 Response Regulator Gene Family AT5G24470 65.672 1.42e-19 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lele37g0146 Response_reg 4.8e-21 CL0304