Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0139 ATGTCGATAATGTCGCTACAACAAAGGCAATTCCAGATGGTGGGAGGGCAATACAACGACACAACATTGACAAAAATCTTCGTGGGAGGGCTTGCTTGGGAGACTCAAAGGGACACAATGAGCAGATATTTTGAGCAGTTCGGAGAGATCCTTGAAGCTGTTGTTATCACAGACAAGAACACAGGAAGATCCAAGGGTTATGGCTTTGTCACATTTAAGGATCCAGAAGCAGCCATGCGAGCATGTCAGAACCTTTCTCCAGTTATTGATGGAAGAAGAGCAAACTGCAATCTTGCTTCTCTTGGTGCAAACAAGAATCGTCCTCCAACTCCTCAACTTGGTACGGGAAGGTTCAGAGCAGCAGCTGGAATGGTGGGCTTGCCAGCAGCATATCCTGGCTCTTCTTCGTCCACAATTTTCCGTCAACCACCCACAGGGCAATACATATTTCTATATTTACCTTACGGATTGTCTGGATATTCACAAGACTCCATATATCCCTTGAACTATTACAATGCGTATGGAGGTCAACAATTTTCACCATATTATTCAACCAGTAACATTTACCCATTCTTTACTCAATATTCACAGAGTGGGCAGGCTCATCATGGTTTTGGAATTCATCAGTATCATCATCCTCAAATGCTACAACACTTCCCAGTCCTTCATCAACACCACTATGGCACTGTCTCTCCTCCACTCCTGCCATTTCCTTCTTCAATGCCAATGCCAACTACTAGCGAAGTGGCAGCAGAGGGGCAGACAGCAGCATCAGTAGGGCCAGGTGGTGCTTCACAAGTCTCTGCAGTAAAAGCTTCGGAACAAAACTCTTCAACTTGA 840 0.4512 MSIMSLQQRQFQMVGGQYNDTTLTKIFVGGLAWETQRDTMSRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPEAAMRACQNLSPVIDGRRANCNLASLGANKNRPPTPQLGTGRFRAAAGMVGLPAAYPGSSSSTIFRQPPTGQYIFLYLPYGLSGYSQDSIYPLNYYNAYGGQQFSPYYSTSNIYPFFTQYSQSGQAHHGFGIHQYHHPQMLQHFPVLHQHHYGTVSPPLLPFPSSMPMPTTSEVAAEGQTAASVGPGGASQVSAVKASEQNSST 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0139 279 CDD RRM_RBM24_RBM38_like 24 99 - -
Lele37g0139 279 SUPERFAMILY RNA-binding domain, RBD 16 107 IPR035979 GO:0003676
Lele37g0139 279 Gene3D - 4 114 IPR012677 -
Lele37g0139 279 SMART rrm1_1 25 97 IPR000504 GO:0003723
Lele37g0139 279 MobiDBLite consensus disorder prediction 242 279 - -
Lele37g0139 279 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 26 85 IPR000504 GO:0003723
Lele37g0139 279 PANTHER BOULE-RELATED 15 245 IPR037366 -
Lele37g0139 279 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 24 101 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0139 Lele-ChrLele37 1156702 1158201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0139 20 100 C2H2 Transcription Factor Family AT2G19380 43.210 1.29e-14 71.6