Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0131 ATGAATGCCGCGAAATCTCGGACCCGCGTGGGAAAATACGAACTGGGCAAAACCATTGGCGAGGGTAGCTTCGCCAAGGTGAAGTTTGCGAGAAACGTTGAGACAAGGCAGCACGTCTCCATCAAAATCCTCGACCGTAACCATGTGCTTCGACACAAGATGGTGGAACAGCTGAAGAGAGAAATTTCCACAATGAAGCTGATCAAACATCCGAATGTTGTTAATATATTTGAGGTGATTGCAAGCAAAACAAAGATTTACATTGTGCTTGAGTTTGTTGGTGGGGGAGAACTATTTGACAAAATAGCTAATGATGGGAGACTTAAGGAGAATGAAGCAAGGCAATATTTCCAACAACTTATTAATGCCGTTGATTACTGTCATAGCAGAGGCGTGTTTCACAGAGACTTGAAGCCTGAGAATCTTCTTCTGGACTCCAATGGTATTCTTAAAGTTTCAGATTTTGGACTGAGTACATACTCACAGCAAGATGATGCATTGCTACGCACTGCCTGTGGAACCCCTAATTATGTTGCTCCTGAGGTGCTTAATGCTAAAGGCTATGATGGTTCGGCAGCAGATATTTGGTCATGTGGTGTCATTCTCTTTGTTCTGATGGCTGGATACTTACCTTTTGATGAGCCAAATCAAATGGCTTTGTATAAGAAAATTAGCAAGGCTGAATTCTCATACCCATCATGGTTTCCACCAGATGCAAAGAAACTGCTGAGTCGTATTCTTGATCCAAACCCTCTCACTAGGATAAAAATTCAGGAACTCCTGGAAGATAAATGGTTCAAGGAAGGATACAAACCACCATGTTTTGAAGAGGAAGAAGGTATAAATGTAGATGATGTAGCTGCGGCCTTCAATGATTCTAAGGAAAACCTTGTGACAGAAAGGAAAGAAAAACCCGTCTCCATGAATGCGTTTGAGCTCATTTCTTCGAGGTCACAGAGTTTCAATCTTGACAGTTTGTTTGAGAAAGAGATGGGTATTGTGAAACGAGAAACACGATTTACTTCTCAGCGCCCTGCACATGAAATTATATCTAAAATTGAGGAAGCTGCCAAACCACTAGGATTTAATGTTCACAGGCGAAACTACAAGATGAAGCTTCAGGGTGACAAGAGTGGAAGGAAGGGACACCTCTCTGTGGCCACTGAGGTTTTTGAAGTGGCTCCCTCACTGCACATGGTGGAGTTGCGGAAGACAGGGGGTGACACACTGGAGTTTCACAAGGCAAGTGAAATTTGCACAACTCATTTTCTACAAAAGCTTCTCGTCAGGTTTGCAAGATGTAGTATGGAATTCTGA 1317 0.4275 MNAAKSRTRVGKYELGKTIGEGSFAKVKFARNVETRQHVSIKILDRNHVLRHKMVEQLKREISTMKLIKHPNVVNIFEVIASKTKIYIVLEFVGGGELFDKIANDGRLKENEARQYFQQLINAVDYCHSRGVFHRDLKPENLLLDSNGILKVSDFGLSTYSQQDDALLRTACGTPNYVAPEVLNAKGYDGSAADIWSCGVILFVLMAGYLPFDEPNQMALYKKISKAEFSYPSWFPPDAKKLLSRILDPNPLTRIKIQELLEDKWFKEGYKPPCFEEEEGINVDDVAAAFNDSKENLVTERKEKPVSMNAFELISSRSQSFNLDSLFEKEMGIVKRETRFTSQRPAHEIISKIEEAAKPLGFNVHRRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKASEICTTHFLQKLLVRFARCSMEF 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0131 438 SUPERFAMILY Protein kinase-like (PK-like) 10 279 IPR011009 -
Lele37g0131 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Lele37g0131 438 ProSiteProfiles NAF domain profile. 303 328 IPR018451 GO:0007165
Lele37g0131 438 FunFam Non-specific serine/threonine protein kinase 4 92 - -
Lele37g0131 438 CDD CIPK_C 309 414 - -
Lele37g0131 438 FunFam Non-specific serine/threonine protein kinase 6 306 - -
Lele37g0131 438 Pfam NAF domain 305 365 IPR004041 GO:0007165
Lele37g0131 438 Pfam Protein kinase domain 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0131 438 Gene3D Kinase associated domain 1, KA1 302 429 - -
Lele37g0131 438 FunFam Non-specific serine/threonine protein kinase 302 428 - -
Lele37g0131 438 ProSiteProfiles Protein kinase domain profile. 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0131 438 SMART serkin_6 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0131 438 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 414 - -
Lele37g0131 438 Gene3D Transferase(Phosphotransferase) domain 1 93 291 - -
Lele37g0131 438 Gene3D Phosphorylase Kinase; domain 1 2 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0131 Lele-ChrLele37 1079446 1084420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0131 6 423 CBL-interacting serine-threonine protein kinases AT1G01140 75.059 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele37g0131 Pkinase 2.6e-71 CL0016