Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0113 ATGGGCGTTGGCATCTTTAGGTGCTCTTGTTCCATTTCAGGCACAGAGCTCTCTCTCTCTCCACACGCCCCCCCCCCCCCGGGCTCCTGTGTTGTAAACAAGAACAAGAAGATGGGAAGAGCTCCTTGCTGTGCAAAAGTTGGGTTGCACAGAGGTCCTTGGACTCCTAAAGAAGACGCATTGCTCACCAAGTACATCCAAACTCATGGTGAAGGCCAATGGCGATCCTTACCTAAACGAGCTGGGCTTTTGAGGTGTGGAAAAAGTTGCAGGCTGAGATGGATGAACTATCTGAGACCAGACATAAAGAGAGGCAACATAACACCAGAAGAAGACGATCTCATAATCAGAATGCATTCTCTTCTGGGGAATCGATGGTCTCTCATTGCGGGAAGATTGCCTGGCAGAACAGATAACGAAATCAAAAACCACTGGAACACTCATCTCAGCAAAAGGCTAAGGAATCAAGGAACCGACCCAATCACTCACAAGAAGCTCATCTCCTCCCTACCTCATAATAACAGTTCCAAGAAGAAAGCGGGTAAGAAGAAGAAGAAAGGAAAGGCAAACGACAATAATAATGGAGAACGAGAAGAGAAAGATGAAGAGAAGAAGACGATAGTGTATCTGCCGAAGCCAATCAGAATCACGGCCTGTTTGTCTTCTCCGATTCCCAGAAGTGACAGTGACCAGAACTTGAACTCGTTAGATTCCAACTCAGCGAGTGGATCCACGAGTCAAGAGAAGGAGGAGGAAGAGAAGAACAAAGGGAACGTTCTATGGGAGGAGAATAATAATAATAATAATAGTAACAATAATTATAGTAATTACTATGATTATAACTATACTTATGGTGGTGACGAAGAAGATCATAACAATAATGGGTTTGTGGGGACGTTTCTTGAGGAAGAGCATGAGTTGGTCAACGGGTCGGACATGGAGGGGCAATCGGAGTTTCCAACGTCGGCGGAGCAACACGGGACGCTGGAGAAGCTGTACGAGGAATACTTCCAGCTGTTGAATAACCAAGAAAACCAAGAGGAGCTAGAATCGTTTGCTGAATCCTTGCTGGTTTGA 1077 0.4568 MGVGIFRCSCSISGTELSLSPHAPPPPGSCVVNKNKKMGRAPCCAKVGLHRGPWTPKEDALLTKYIQTHGEGQWRSLPKRAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNHWNTHLSKRLRNQGTDPITHKKLISSLPHNNSSKKKAGKKKKKGKANDNNNGEREEKDEEKKTIVYLPKPIRITACLSSPIPRSDSDQNLNSLDSNSASGSTSQEKEEEEKNKGNVLWEENNNNNNSNNNYSNYYDYNYTYGGDEEDHNNNGFVGTFLEEEHELVNGSDMEGQSEFPTSAEQHGTLEKLYEEYFQLLNNQENQEELESFAESLLV 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0113 358 Gene3D - 106 169 - -
Lele37g0113 358 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 38 268 - -
Lele37g0113 358 FunFam Myb transcription factor 48 104 - -
Lele37g0113 358 FunFam MYB transcription factor 105 166 - -
Lele37g0113 358 MobiDBLite consensus disorder prediction 150 175 - -
Lele37g0113 358 Coils Coil 329 349 - -
Lele37g0113 358 MobiDBLite consensus disorder prediction 148 204 - -
Lele37g0113 358 CDD SANT 108 149 IPR001005 -
Lele37g0113 358 Pfam Myb-like DNA-binding domain 104 149 IPR001005 -
Lele37g0113 358 Pfam Myb-like DNA-binding domain 51 98 IPR001005 -
Lele37g0113 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 98 IPR017930 -
Lele37g0113 358 MobiDBLite consensus disorder prediction 260 274 - -
Lele37g0113 358 MobiDBLite consensus disorder prediction 222 245 - -
Lele37g0113 358 ProSiteProfiles Myb-like domain profile. 46 98 IPR001005 -
Lele37g0113 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 99 153 IPR017930 -
Lele37g0113 358 SUPERFAMILY Homeodomain-like 48 145 IPR009057 -
Lele37g0113 358 SMART sant 103 151 IPR001005 -
Lele37g0113 358 SMART sant 50 100 IPR001005 -
Lele37g0113 358 CDD SANT 53 98 IPR001005 -
Lele37g0113 358 MobiDBLite consensus disorder prediction 220 274 - -
Lele37g0113 358 Gene3D - 51 103 - -
Lele37g0113 358 ProSiteProfiles Myb-like domain profile. 99 149 IPR001005 -
Lele37g0113 358 MobiDBLite consensus disorder prediction 187 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0113 Lele-ChrLele37 916151 917442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0113 29 183 MYB Transcription Factor Family AT3G13540 63.226 5.15e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele37g0113 Myb_DNA-binding 8.7e-14 CL0123