Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0104 ATGGAGCCAACACCTCCTCCCTGCACTCGCGAAGATGGCCTAACAGCCGCCGTTTCCTCCGCCGCCATTGAGCCGGTTGACAAATCTGATAACTCTCGAGTCGGAGGCACGCGCCACCCGGTCTACCGGGGTGTCCGTAAGCGGCGTTGGGGTAAATGGGTGTCGGAAATCCGAGAGCCGCGCAAGAAATCGCGAATATGGCTGGGGTCGTTTCCGGTACCTGAGATGGCAGCGAAGGCATATGACGTGGCGGCGTACTGCCTGAAAGGCAGGAAGGCGCAGCTCAATTTTCCCGACGAGGTCGAGCACTTGCCGCGGCCGTCCACATGTGCCGCCAGAGATATCCAGGAGGCGGCAGCTAAGGCGGCTCATGCAATGAAAGCCTCCGAGAAGAAGAATAGCATTATTTCCGACGGATACGGTGACGGCGACGGCGACAGCGGCGGGGATGATTTTTGGGGCGAGATTGAATTGCCAGAGCTAATGAACAGCGGGTGTTCCTGGAGTTCTCCGAGTGGTTCATCGTGGGCTCCTTCCGGCGACATCACGGCGTGGCCGGAGATGGAGCTTCCGGCGCAGCAGCAACCATTCATGGCGTGCTTATAA 606 0.5924 MEPTPPPCTREDGLTAAVSSAAIEPVDKSDNSRVGGTRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAYCLKGRKAQLNFPDEVEHLPRPSTCAARDIQEAAAKAAHAMKASEKKNSIISDGYGDGDGDSGGDDFWGEIELPELMNSGCSWSSPSGSSWAPSGDITAWPEMELPAQQQPFMACL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0104 201 Gene3D AP2/ERF domain 41 99 IPR036955 GO:0003700|GO:0006355
Lele37g0104 201 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 29 133 - -
Lele37g0104 201 PRINTS Ethylene responsive element binding protein signature 80 100 IPR001471 GO:0003700|GO:0006355
Lele37g0104 201 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Lele37g0104 201 CDD AP2 42 99 IPR001471 GO:0003700|GO:0006355
Lele37g0104 201 MobiDBLite consensus disorder prediction 1 39 - -
Lele37g0104 201 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Lele37g0104 201 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
Lele37g0104 201 SUPERFAMILY DNA-binding domain 41 100 IPR016177 GO:0003677
Lele37g0104 201 FunFam Ethylene-responsive transcription factor 2 40 99 - -
Lele37g0104 201 Pfam AP2 domain 40 90 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0104 Lele-ChrLele37 828278 828883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0104 1 201 AP2-EREBP Transcription Factor Family AT1G01250 56.796 1.91e-62 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele37g0104 AP2 2.1e-13 CL0081