Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0103 ATGAAGCTTGAGTTGGGTTTAGGAGGTTTGTTGTTGAATGATGAAGAAAAAGCCATGGTTGCATCGGTTCTGGGAAATCGAGCTTTTGAATACTTGATTACGAACCCTGTGGCGAACGACAATTTGTTAATGACTGTCGGAAGCGACGAAAGTTTGCAGAACAAGCTTTCGGATCTCGTGGACCGTCCAAACTTATCGAATTTCAGCTGGAACTATGCGATTTTCTGGCAAATATCACAGTCGAAGAAATCTGGGGATTGGGTTTTGGGTTGGGGAGATGGATGTTGCAGAGAACCCAAGGGAGAAGAAGAAGAAGGTGGAGTTAGAGGGCTTCTGACTCTTAGCCTGGAAAAAGATGAGATGCAGCAGAGGATGAGGAAAGGGGTGCTTCAGAAGCTTCACACAACATTTGGGGGTTCTGATGAAGACAATTATGCCTTTGGATTAGATAGGGTTACTGATACAGAGATGTTCTTTCTGGCTTCCATGTACTTCTCCTTCCCTCGCGGCCATGGGGGGCCTGGTAAATGCCTTGCTTCAGGGAAGCATGTGTGGTACTCTGATGCACTTAGCTCTGATTATTGTGTGAGATCATTTTTGGCAAAATCAGCTGGAATTCAGACCATAGTTTTGGTCCCTACTGACATAGGAGTGGTGGAATTAGGTTCTGTGAGGATGGTAGGAGAGAGCTCAGAATTGTTGCAGGTGATAAAATCTGAATTTTCTACACAGATGTCAATTCCTAGGGTTTCCCCACTTTCGCCATTGCCTGTTGTGATGAATGAGAAGCGAGATGAAAATGGCATCTTTTCTGGCTTGCCTGTTGGGGATAAGGTGGAGGGAGTTCCGAAGATTTTTGGGCAAGACTTGAACTCGTTAAACACTAGTCGTCCCCATTTTAGGGAGAAGCTTGCTGTGAGGAAAATGGAAGAGAGGCCTTGGGCAGGTCATAGTCAGCCCAATGGCAGTAGTATTAGCTTTCCAAGTGCGCAAAACGGTATTCATGGATCGAGTTGGGCTGCTAATCAAGGTGGGAAACAGGCGAGCCCAACGGAGATTTATCCTTCAAGGTCCTCGGGTTGCAATGCTTCGGAGGGAGTTAACCAGTACAGGCAAGACTTTCGGCTTAGCAACTACCAACCACAAAGGCAGGTGCAAATGCAAATTGATTTCTCCGGAGCCACTTCAAGGCCTTCTGTGAGACCAATGAATGCTGAATCAGAGCTGTCTGATGTTGAAGCTTCATGTAGAGAAGAGCAGCTGGGTGCAACAGATGAAAGGAGGCCAAGGAAACGGGGTAGAAAGCCTGCCAATGGAAGAGAAGAACCCTTGAATCACGTGGAAGCGGAGAGGCAGAGGCGTGAGAAGCTGAATCAACGGTTCTATGCTCTTAGATCTGTTGTGCCGAATATATCCAAGATGGACAAGGCTTCTTTGCTAGGAGATGCCATTGCCTATATCAATGAGCTTCAAGCAAAACTCAAGATCATGGAATCTGAGAAAGATCAATCTGAAAGCACTTCGAGGGATGTATCGGCATCAGAGGCTGATCCAAAAGTAGAAAATCACAATCAAGCTACTAATGTTGATATTCAAGCTACCCAGGATGAGGTAATAGTAAGGTTGAGCAGCCCTCTCAATGCTCATCCTATTTCGAGGGTTCTCCAGAAGTTCAAAGATGCACAAATTAGCGTTGTTGAGTCGAAATTTACAACTGCAAATGACACCATCTTCCATTCATTTGTAATCAAGTCTGAAGGATCTGAGCAGCTGGCGAAGGAGAAGTTGATTGCAGCATTTTCTTGA 1806 0.4557 MKLELGLGGLLLNDEEKAMVASVLGNRAFEYLITNPVANDNLLMTVGSDESLQNKLSDLVDRPNLSNFSWNYAIFWQISQSKKSGDWVLGWGDGCCREPKGEEEEGGVRGLLTLSLEKDEMQQRMRKGVLQKLHTTFGGSDEDNYAFGLDRVTDTEMFFLASMYFSFPRGHGGPGKCLASGKHVWYSDALSSDYCVRSFLAKSAGIQTIVLVPTDIGVVELGSVRMVGESSELLQVIKSEFSTQMSIPRVSPLSPLPVVMNEKRDENGIFSGLPVGDKVEGVPKIFGQDLNSLNTSRPHFREKLAVRKMEERPWAGHSQPNGSSISFPSAQNGIHGSSWAANQGGKQASPTEIYPSRSSGCNASEGVNQYRQDFRLSNYQPQRQVQMQIDFSGATSRPSVRPMNAESELSDVEASCREEQLGATDERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAIAYINELQAKLKIMESEKDQSESTSRDVSASEADPKVENHNQATNVDIQATQDEVIVRLSSPLNAHPISRVLQKFKDAQISVVESKFTTANDTIFHSFVIKSEGSEQLAKEKLIAAFS 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0103 601 MobiDBLite consensus disorder prediction 317 365 - -
Lele37g0103 601 FunFam Transcription factor bHLH13 434 508 - -
Lele37g0103 601 MobiDBLite consensus disorder prediction 311 365 - -
Lele37g0103 601 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 441 490 IPR011598 GO:0046983
Lele37g0103 601 MobiDBLite consensus disorder prediction 498 517 - -
Lele37g0103 601 PANTHER MYC 41 599 IPR045084 GO:0003700|GO:0006355
Lele37g0103 601 MobiDBLite consensus disorder prediction 411 452 - -
Lele37g0103 601 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 444 504 IPR036638 GO:0046983
Lele37g0103 601 CDD bHLH_AtAIB_like 438 512 - -
Lele37g0103 601 MobiDBLite consensus disorder prediction 498 530 - -
Lele37g0103 601 Coils Coil 487 507 - -
Lele37g0103 601 SMART finulus 447 496 IPR011598 GO:0046983
Lele37g0103 601 MobiDBLite consensus disorder prediction 393 452 - -
Lele37g0103 601 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 241 IPR025610 -
Lele37g0103 601 Pfam Helix-loop-helix DNA-binding domain 445 491 IPR011598 GO:0046983
Lele37g0103 601 Gene3D - 433 517 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0103 Lele-ChrLele37 811800 813605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0103 5 601 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 49.282 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele37g0103 bHLH-MYC_N 2.2e-52 CL0161