Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0100 ATGGTGCTGGATACCGGAAGCGACATCGTTTGGCTCCAATGTTCTCCTTGTAAGAGATGCTACCCTCAGACCGACCCGGTTTTTAACCCGTCCAAATCCAGATCCTTCACCGGAGTTCCTTGTGGGTCCCCACTGTGCCACCGGCTGGACGCTTCTGGATGTAATCAGAAGAAGAAGGTGTGTATGTACCAAGTTTCATATGGGGATGGTTCGTTCACTGTTGGTGAGTTCGCCACTGAAACGCTGACGTTTCGAGGGACAAGGATGGGGCGAGTGGCTCTAGGTTGTGGCCACGATAATCAAGGACTCTTCGTCGGTGCGGCGGGTCTGTTAGGCCTCGGAAGAGGGAGGCTATCGTTCCCGTCTCAAACCGGCCGTCGGTTCAACCGGAAATTCTCGTATTGCTTGGTGGATCGGTCTGCGTCATCTCGGCCGTCGGCTATTTTGTTCGGTGACTCTGCTGTTTCCCGAACTGCTCGTTTCACTCCTCTTCTCAGAAACCCCAAACTCGGTACATTCTACTACGTGGAACTCCTCGGGATGAGCGTGGGCGGCGCGCCGGTGCGCGGGCTCTCGGCTTCGCTGTTCCGGCTCGATCCAACTGGGAACGGTGGCGTCATCATTGACTCGGGCACGTCGGTCACTCGGCTCGCCCAGCCGGCTTACATTGCCCTGAGGGACGCATTCCGAGCCGGAGCGTCCCACCTGAAGCCAGCACCAGAGTTCTCGCTCTTCGACACATGCTACGACTTGTCGGGGAAGACGGAGGTGAAGGTGCCAACAGTGGTGCTACATTTCCGAGGTGCTGACGTGTCACTTCCAGCGACGAATTACCTGATCCCCGTGGATACCAGTGGGACCTTCTGCTTCGCCTTCGCTGGAACGGGGGCCGGTTTGTCGATAATCGGAAACATCCAACAGCAAGGGTTTCGAGTGGTGTTCGACTTGGGGAGTTCTCGGGTCGGGTTCGCACCGCGTGGGGACTTTTTGGACGTTAACCCTCTCTTGCTGAATCCAAAAGCACTCAAAGACACCATCGACTTGTTCGTTGAACAATATAAAGGCAAACATATTTCTGTCGTTGCAGGAGTTGAAGCAAGGGGTTTCATATTTGGGGATCCCATAGCGGTGGGAATAGGAGCCAAGTTTGGGGCTTTAAGGGAACCAAACAAGCTTCCCGGCAAAGTGATGAGAACAGAGTAA 1203 0.5503 MVLDTGSDIVWLQCSPCKRCYPQTDPVFNPSKSRSFTGVPCGSPLCHRLDASGCNQKKKVCMYQVSYGDGSFTVGEFATETLTFRGTRMGRVALGCGHDNQGLFVGAAGLLGLGRGRLSFPSQTGRRFNRKFSYCLVDRSASSRPSAILFGDSAVSRTARFTPLLRNPKLGTFYYVELLGMSVGGAPVRGLSASLFRLDPTGNGGVIIDSGTSVTRLAQPAYIALRDAFRAGASHLKPAPEFSLFDTCYDLSGKTEVKVPTVVLHFRGADVSLPATNYLIPVDTSGTFCFAFAGTGAGLSIIGNIQQQGFRVVFDLGSSRVGFAPRGDFLDVNPLLLNPKALKDTIDLFVEQYKGKHISVVAGVEARGFIFGDPIAVGIGAKFGALREPNKLPGKVMRTE 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0100 400 ProSiteProfiles Peptidase family A1 domain profile. 1 324 IPR033121 -
Lele37g0100 400 Gene3D Acid Proteases 1 149 IPR021109 -
Lele37g0100 400 Pfam Xylanase inhibitor C-terminal 174 324 IPR032799 -
Lele37g0100 400 CDD PRTases_typeI 346 400 IPR000836 -
Lele37g0100 400 Gene3D Acid Proteases 150 324 IPR021109 -
Lele37g0100 400 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 206 217 IPR001969 GO:0004190|GO:0006508
Lele37g0100 400 Pfam Xylanase inhibitor N-terminal 1 152 IPR032861 -
Lele37g0100 400 SUPERFAMILY Acid proteases 1 326 IPR021109 -
Lele37g0100 400 SUPERFAMILY PRTase-like 328 400 IPR029057 -
Lele37g0100 400 PANTHER ASPARTYL PROTEASES 1 322 IPR001461 GO:0004190|GO:0006508
Lele37g0100 400 Gene3D - 325 400 IPR029057 -
Lele37g0100 400 FunFam Aspartyl protease family protein 2 152 327 - -
Lele37g0100 400 FunFam Aspartyl protease AED1 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0100 Lele-ChrLele37 788306 793058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0100 329 394 PRT Gene Family AT4G12440 71.212 3.67e-26 99.4