Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0096 ATGATAGTTAAGCGGCCTATGAAAATTGAAATTCCGAAGCTGAAGCGATGCCAATTAGAGGAGCCCGATCCTGAAGACAGTATGTGTGCAGCGAATCCCAAGAAACGGAGGACAAATGGGCTTTTATCTCCTGGTATGCCTGCTGAGGATGAATATTTGAGCAGCGGTTCTGGATTTCTGTGCAGTAAAGAATCGCATTGCGGTGGTGACTTACCGTCGAGCTCAGATTCCATGAAGTTGAATGCTAAAGCAGTACTAAAACCGGGCTCAAAAATGGTTCGTCATCCATTATTGCGGTCGTCGCGAGGTCGCCACCAGACACTTCCGTCGAAGTTCAGGGATTCGGTTCTTAGTACGTGGAAGAATAAAAGAGTCCAAGTGGAGAACACATATTCCAGCTTTAAAGAAGATAATTTTTTAGGGGAAGACGAGTTGAAGTTCAGCGGAATGGAATTTTCAAAACAGGGAGATAGTGTTAACTGTAATCTCAAAAATTCAATGTGTTGTTCATATACTGAAATGGAGAAGGAAAGAGCCTTGGTCGCCTTAGATTTGAATGATTTCGACGCCGCGGAGCATGCGGAATCCTTTAGTACTGTGAGAACAGCAGTTAAAGAGAGTTGTTCATCGTTAGTTAAAGTTCAGAGTTGTGCGTCGGGACTTAATTCTGAAGGTGTTGACCCGAAGACTAATGGGAAAGCTGAAAAAAGGACAGACATTTACAAACTAGAGGATTTTGCTCGCGGTGATATAGTTTGGGCAAAATGCGGGAAGAGGTATCCGGCCTGGCCTGCTATAGTGATTGATCCCATCTTGCAAGCACCCAAATCAGTCCTGAACTGTTGTGTTCCAGGTGCAATTTGCGTAATGTTTTTTGGGTTCTCAAAAAATGGAAAGCAAAGGGACTATGCATGGGTGAGACAGGGAATGGTATTCCCCTTTACGGAATTCATGGAGAGATTCCAGGGGCAGACCCGGCTGTACAGGAGCAAACCAAGTGAGTTTCGAATGGCATTAGAGGAGGCTTTGCTGGCAGAAGATGGAATTCTTGACTCACATTTGGGAGCGGAGATTATTACTAAAAGTAATGTTGAAGCTCATCCCAGTGTAGAGATAGAGGTTACGGGTCCATATGATGATCAGGAGGACTACTGCCAGGACCAGGATGCAAGACTCTGTGCTGGCTGTGGTTTGATGTTACCATGCAAAACCATAAAGAAGAATAAGGATTCTGGTGCTCAACTTTATTGTAGACATTGCTTGAAGTTGCAAAAGTCCAAGCAATATTGTGGCATTTGTAAAAAGATTTGGCACCATGCAGATGGTGGGAATTGGGTATGTTGTGATGGTTGCAATGTTTGGGTGCACGCAGAATGTGATAAAATCTCTAGCAAACTTTTAAAGGATCTGGAGAATACGGATTACTATTGCCCTGATTGCAAAACAAAAGTCAACTGTAACTTAGCAGAATCACGTTCATCCAATTCAAAAATCAATTCAATAGAGAAAAAACAAGAACATAAGATACCTGAGGAGGTAACGGTCGTGTGCAATGGCATGGAAGGAATTTACATTCCAAGTCTTCATTCAGTTATGTGCAAGTGTGGTTCTTGTTGGTCAAGGAAGCAGACACTGAGTGAATGGGAACGGCATACAGGTTGCAAAGCCAAAAAATGGAAATTCAGTGTGAAAGTAAAAAGCACCATGCTACCCCTAGAAAAATGGATTACTGAGAACAATTCTCACGCTGGAGTTTCCCTACAGTTGGATCAGCAGCAAGTACTTGCCGTTTTGCAAGAGAAGTATGAGCCAGTTTATGCAAAATGGACTACAGAAAGGTGTGCCATTTGTAGATGGGTTGAAGATTGGGATGATAACAAGATTGTTATCTGTAACAGGTGCCAAATTGCAGTCCACCAAGAATGCTATGGGGTGAAGAACGTTAAGGATTTTACTTCTTGGGTTTGTAGAGTATGTGAAACTCCTGATGTAGAGAGAGAGTGCTGCCTCTGTCCGGTAAAAGGTGGTGCTCTGAAGCCAACTGATGTTGAAATGCTATGGGTTCATGTGACATGTGCTTGGTTCCGGCCTGAAGTTATTTTCCAAAACCACGAGACAATGGAACCTGCCATTGGAATCCTTAAAATTCCTCCAAATTCGTTTTCAAAGATTTGCATTATCTGTAAACAAAGCCATGGATCGTGCTTAAGTTGTTGCAAATGTGCTACTTATTTTCATGTGATGTGTGCATCAAGAGCTGGATATAGCATGGAATTGCATTCCATAGAGAAGAATGGGAGTCAGATAACAACAAAGCTAATATATTGTGCGGTTCATAGGGCCCCAAAACCAGATTCAGTACTGGTTGTGCATACACCCCAAGGGGTTTTCTCTCCCAGAACTGAACTTCAAAATCATAAGGGATGCTTCAGGGGATCAAGGCTAGTTTCACCAAGGGATGTAGAACTTCTTGAAGAGTCCTCAACCTCTGAGATTAATGAGTGTGAGCCATCCTCTGCTGCCAGATGTCGTGTTTACAGAAGGCCTCTTAATAAGAAAGTTGATATGCCGGTAATTCACTTACTGGGTGGACCAAGATATCATTCATTAAGTGCAATAACTCAATTGAACAGTTATAAGGATGTTGAACATTCTGAAGCGTTTATTTTGCTCAAGGAACGCCTTTATCATTTGCAGAAAACTGTAAAGCATCAAGTTTGCTTTGGAAAATCTGGTATACATGGATGGGGCCTCTTTGCTTATCGAGATATAGAAGAAGGACAGATGGTCGCTGAGTATTGTGGTGAGCAGGTAAGACGGAGCATTGCTGATTTAAGGGAAGCAAAGTACCGGTCAGAAGGCAAAGATTGTTATCTATTCAAGGTCAGCGAGGAAGTTGTAATTGACGCAACAGATAAGGGCAACATAACACGCTTGATAAACCATTCTTGCATGCCGAATTGCTATGCGAGGATTGTAAGTTTGGATGATGAGGAGAGCCGAATTGTTCTTATTGCCAAGACCAATATCTCTGCCGGTGAAGAACTAACTTATGACTACTTGTTCGATCCGGATGAGCTTGAACTGAAAGTTCCCTGTCATTGCAACGCCCCAAATTGTAGGAGATTTATGAATTAG 3138 0.4254 MIVKRPMKIEIPKLKRCQLEEPDPEDSMCAANPKKRRTNGLLSPGMPAEDEYLSSGSGFLCSKESHCGGDLPSSSDSMKLNAKAVLKPGSKMVRHPLLRSSRGRHQTLPSKFRDSVLSTWKNKRVQVENTYSSFKEDNFLGEDELKFSGMEFSKQGDSVNCNLKNSMCCSYTEMEKERALVALDLNDFDAAEHAESFSTVRTAVKESCSSLVKVQSCASGLNSEGVDPKTNGKAEKRTDIYKLEDFARGDIVWAKCGKRYPAWPAIVIDPILQAPKSVLNCCVPGAICVMFFGFSKNGKQRDYAWVRQGMVFPFTEFMERFQGQTRLYRSKPSEFRMALEEALLAEDGILDSHLGAEIITKSNVEAHPSVEIEVTGPYDDQEDYCQDQDARLCAGCGLMLPCKTIKKNKDSGAQLYCRHCLKLQKSKQYCGICKKIWHHADGGNWVCCDGCNVWVHAECDKISSKLLKDLENTDYYCPDCKTKVNCNLAESRSSNSKINSIEKKQEHKIPEEVTVVCNGMEGIYIPSLHSVMCKCGSCWSRKQTLSEWERHTGCKAKKWKFSVKVKSTMLPLEKWITENNSHAGVSLQLDQQQVLAVLQEKYEPVYAKWTTERCAICRWVEDWDDNKIVICNRCQIAVHQECYGVKNVKDFTSWVCRVCETPDVERECCLCPVKGGALKPTDVEMLWVHVTCAWFRPEVIFQNHETMEPAIGILKIPPNSFSKICIICKQSHGSCLSCCKCATYFHVMCASRAGYSMELHSIEKNGSQITTKLIYCAVHRAPKPDSVLVVHTPQGVFSPRTELQNHKGCFRGSRLVSPRDVELLEESSTSEINECEPSSAARCRVYRRPLNKKVDMPVIHLLGGPRYHSLSAITQLNSYKDVEHSEAFILLKERLYHLQKTVKHQVCFGKSGIHGWGLFAYRDIEEGQMVAEYCGEQVRRSIADLREAKYRSEGKDCYLFKVSEEVVIDATDKGNITRLINHSCMPNCYARIVSLDDEESRIVLIAKTNISAGEELTYDYLFDPDELELKVPCHCNAPNCRRFMN 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0096 1045 CDD SET_SETD1-like 893 1041 - -
Lele37g0096 1045 FunFam Histone-lysine N-methyltransferase 879 1045 - -
Lele37g0096 1045 Pfam PWWP domain 249 344 IPR000313 -
Lele37g0096 1045 SMART PostSET_3 1029 1045 IPR003616 -
Lele37g0096 1045 SMART PHD_3 613 660 IPR001965 -
Lele37g0096 1045 SMART PHD_3 429 481 IPR001965 -
Lele37g0096 1045 SMART PHD_3 724 780 IPR001965 -
Lele37g0096 1045 Pfam SET domain 915 1020 IPR001214 GO:0005515
Lele37g0096 1045 ProSiteProfiles Zinc finger PHD-type profile. 427 483 IPR019787 -
Lele37g0096 1045 CDD PHD_TCF19_like 430 480 - -
Lele37g0096 1045 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 1045 IPR025780 -
Lele37g0096 1045 SMART PWWP_4 246 315 IPR000313 -
Lele37g0096 1045 SUPERFAMILY Tudor/PWWP/MBT 244 349 - -
Lele37g0096 1045 Pfam PHD-finger 626 660 - -
Lele37g0096 1045 ProSiteProfiles PWWP domain profile. 248 317 IPR000313 -
Lele37g0096 1045 ProSiteProfiles Extended PHD (ePHD) domain profile. 665 780 IPR034732 -
Lele37g0096 1045 ProSiteProfiles Zinc finger PHD-type profile. 611 662 IPR019787 -
Lele37g0096 1045 SUPERFAMILY FYVE/PHD zinc finger 426 486 IPR011011 -
Lele37g0096 1045 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 663 781 IPR013083 -
Lele37g0096 1045 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 422 487 IPR013083 -
Lele37g0096 1045 PANTHER PHD FINGER PROTEINS 59 488 - -
Lele37g0096 1045 Pfam PHD-zinc-finger like domain 667 779 - -
Lele37g0096 1045 ProSiteProfiles SET domain profile. 904 1021 IPR001214 GO:0005515
Lele37g0096 1045 MobiDBLite consensus disorder prediction 21 46 - -
Lele37g0096 1045 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 608 662 IPR013083 -
Lele37g0096 1045 Pfam PHD-finger 429 482 IPR019787 -
Lele37g0096 1045 SUPERFAMILY FYVE/PHD zinc finger 612 676 IPR011011 -
Lele37g0096 1045 ProSitePatterns Zinc finger PHD-type signature. 614 659 IPR019786 -
Lele37g0096 1045 Gene3D - 236 350 - -
Lele37g0096 1045 ProSiteProfiles Post-SET domain profile. 1029 1045 IPR003616 -
Lele37g0096 1045 SMART set_7 904 1027 IPR001214 GO:0005515
Lele37g0096 1045 SUPERFAMILY SET domain 879 1041 IPR046341 -
Lele37g0096 1045 CDD PHD_ATX3_4_5_like 613 659 IPR042011 -
Lele37g0096 1045 Gene3D SET domain 891 1045 IPR046341 -
Lele37g0096 1045 FunFam Histone-lysine N-methyltransferase 663 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0096 Lele-ChrLele37 767501 774974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0096 614 779 C2H2 Transcription Factor Family AT3G14740 33.526 1.15e-20 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lele37g0096 zf-HC5HC2H_2 8e-29 CL0390