Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0090 ATGGTATTCATTATGAGAGGAGAACTTAATTCTATGACAACAAATGGTGGAACAACTGGTTTTTTCAACTCCGTCATCATCAAGGAAGGTGACTTCTCTGGAGATGGGATTTTACAATGGGCCGACTCATCATCCTCAAATCTTCCCGTTTCAACCAGAACAGTAGAATCTATATCAGAAGTTGAAGCCTACGCTCTCATGGCTCATGACTTGAAGCTCCTTGCTTCCCAAAATCGATGCTTTATCAACAAACAGATGGAGCACACTTTAAGTGATCATGCACTCATGTTTGATAAGAGATTTAAGGACTGGAGTTCAGAATCATATTTCGGTGTTGAGAAAACAAATTATGCTGATGAAAGATATCCTCAGAGAAAAGTTAGGCCAAGAGTAAGAGCTGGGTTTAAGAATATTAGAAGAAGAATCCAGATAAGGCTTGAGAAGATTAAAACCTTGAGAAAACCTGTAAATGTGCATCCAGTAAGTGATGCAACGCCCAAGAAACCGGCTTCGGAGAGGAAGATTCTTGATCCACAGGGGTCTTTCCTTCAGAAATGGAACAAAATATTTGTGATCACATGTGTACTGGCAGTATCTGTGGATCCTCTGTTCTTTTACGTCCCAGTTATTGATAACAACGGAAAATGCCTTGATTTGAATAAACCATTGCAGATTACTGCCAGTGTTCTTCGTACATTCTTTGACCTTTTCTACATTCTCCACATAACGTTTCAGTTTCGAACTGGTTTTATCGCCCCTTCTTCTCGAGTATTTGGTAGGGGTGAGCTCATTGATGATCCTAAGGCTATTGCAAAAAGATACTTATCTTCATACTTCATCATTGACATACTCTCAATTATTCCAGTTCCACAGGTGGTTCTTTTAGCAATGAGACATTCAGGTCATTCTGAAGAAAAGGACTGCTTATATTATGCAATATTAATCCAATATGTCCCTAGATTTCTTCGGATCTATCCATTATTCACAGAAGTAACTAGAACTTCTGGCATACTCACTGAGACTGCATGGGCTGGCGCTGCATATAATCTCTTTCTCTATATGCTTGCAAGTCATGTGGTTGGAGCTTTCTGGTACCTGTTTTCAGTAGAATCAGAGCTTCGGTGCTGGCACAGAGAATTGAAGAATGCTAGTTTGCCTACATACATCAGTTGTCCATATCAGAATCCAAATGTCAGAACATTTCTCTATAATTCTTGTCCCTTCAAGGATCCTGACGAAATTGACAGCCCCAAAGTCTTCAATTTTGGAATGTATACTGATGCTTTAAAATCTCATGTGGTGGAATCAACAATGAATTTTCCTCAGAAGATCTTCTTCTGCTTTTGGTGGGGTTTGCGCAATGTAAGTTCTCTGGGACAAAATCTCAAGACAAGTACATATGCCGGGGAGATCATCTTTGCTTGCTTCATCGCAATCTTTGGGCTGGTTTTGTTCTCATTACTCATTGGAAACATGCAGAAATATCTACAATCTGTAACCGTTAGAGTTGAAGAAATGAGAATCAAGAGGAGGGATGCAGAGAGGTGGATGTCCCACCGTATGCTGCCTGAGCACTTAAGGGAAAGAATCAGACGGTATGAGCATTACAAATGGCAAGAAAACAGGGGTGTGGATGAGGAAACATTAATCCACAATCTTCCTAAAGATCTCAGAAGAGACATAAAGCGTCACCTATGCTTGGATTTACTTAAAAAAGTGCCAATGTTTGAGAAAATGGACGAGCAGTTGTTGGATGCACTTAGTGATAGGCTGAAGCCAGTACTTTATACAGAGAAGAGCCACATTATTAGGGAAGGAGATCCAGTGGATCAAATGCTCTTCATTATGAGAGGAAACCTTGCTACAATGACAACAAATGGGGGAAGAACTGGGTTTTTCAACTCTTTCGTGATCAAGGCGGGTGACTTCTGTGGAGAGGAGCTTTTAACATGGGCCTTGGACCCCAACTCATCCTCAAATCTTCCCATTTCAACCAGAACAGTGGAATCTATATCAGAAGTTGAAGCATTCGCTCTCATGGCTAATGACTTGAAGCTCGTTGCTTCCCAATTTCGACGCCTTCACAACAAACACATCCAGCACACTTTCAGGTACTATTCCTTGCAATGGAGGACATGGGCTGCGTGTTTCATACAAGTAGCATGGCGTCGCCACTGTAAAAGGAAGATTGAGAAAGCTTTACGCGAAGCAGAAGACAGGCTAAAAGATGCTTTGGAAAAGGAGGAAGGTTCTTCTGTAAGTTTTGGTGCCACCATATATGCATCAAGGTTTGCTGCCAATGCCTTACGCAGTCTGCGAAAAAATGGGGACCGAAAAAACAACAGAATGTCTCAGAGACTGCTGCCTCTGTTGCCTCAGAAGCCAACTGAGCCTGATTTCACTACACAATCTTTAGAAGAATCTTAG 2427 0.4133 MVFIMRGELNSMTTNGGTTGFFNSVIIKEGDFSGDGILQWADSSSSNLPVSTRTVESISEVEAYALMAHDLKLLASQNRCFINKQMEHTLSDHALMFDKRFKDWSSESYFGVEKTNYADERYPQRKVRPRVRAGFKNIRRRIQIRLEKIKTLRKPVNVHPVSDATPKKPASERKILDPQGSFLQKWNKIFVITCVLAVSVDPLFFYVPVIDNNGKCLDLNKPLQITASVLRTFFDLFYILHITFQFRTGFIAPSSRVFGRGELIDDPKAIAKRYLSSYFIIDILSIIPVPQVVLLAMRHSGHSEEKDCLYYAILIQYVPRFLRIYPLFTEVTRTSGILTETAWAGAAYNLFLYMLASHVVGAFWYLFSVESELRCWHRELKNASLPTYISCPYQNPNVRTFLYNSCPFKDPDEIDSPKVFNFGMYTDALKSHVVESTMNFPQKIFFCFWWGLRNVSSLGQNLKTSTYAGEIIFACFIAIFGLVLFSLLIGNMQKYLQSVTVRVEEMRIKRRDAERWMSHRMLPEHLRERIRRYEHYKWQENRGVDEETLIHNLPKDLRRDIKRHLCLDLLKKVPMFEKMDEQLLDALSDRLKPVLYTEKSHIIREGDPVDQMLFIMRGNLATMTTNGGRTGFFNSFVIKAGDFCGEELLTWALDPNSSSNLPISTRTVESISEVEAFALMANDLKLVASQFRRLHNKHIQHTFRYYSLQWRTWAACFIQVAWRRHCKRKIEKALREAEDRLKDALEKEEGSSVSFGATIYASRFAANALRSLRKNGDRKNNRMSQRLLPLLPQKPTEPDFTTQSLEES 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0090 808 FunFam Cyclic nucleotide-gated ion channel 1 502 566 - -
Lele37g0090 808 MobiDBLite consensus disorder prediction 775 808 - -
Lele37g0090 808 CDD CAP_ED 575 706 IPR000595 -
Lele37g0090 808 Coils Coil 727 747 - -
Lele37g0090 808 FunFam Cyclic nucleotide-gated ion channel 1 573 691 - -
Lele37g0090 808 Pfam Ion transport protein 186 503 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele37g0090 808 ProSiteProfiles cAMP/cGMP binding motif profile. 575 659 IPR000595 -
Lele37g0090 808 SUPERFAMILY Voltage-gated potassium channels 177 497 - -
Lele37g0090 808 Gene3D - 188 501 - -
Lele37g0090 808 Gene3D Helix hairpin bin 502 566 - -
Lele37g0090 808 Gene3D Jelly Rolls 573 693 IPR014710 -
Lele37g0090 808 Gene3D Jelly Rolls 1 79 IPR014710 -
Lele37g0090 808 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 91 - -
Lele37g0090 808 SUPERFAMILY cAMP-binding domain-like 504 700 IPR018490 -
Lele37g0090 808 SMART cnmp_10 575 706 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0090 Lele-ChrLele37 742951 749848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0090 100 802 Ion Channels AT5G53130 63.202 0.0 909