Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0084 ATGGAGGCCCTCAATGCTGCTACCTTGACCCCTTTATCAGTTCTCTGCGATAGAAGAAAACAACCCAGAAAATTCTCATCACTGCCCAGAATTTCCGTTAGCAAAGTCTCAGATTCTGCCATTTTTCCCTCCAAGAAACCATCTCTGAATGGGGATTTACCTGCAGGTTTACGTGGGGGACTTCTTCTTGCAGCTTCAGTCATCAATGGAGGAATTGCTAAAGCTCTAACATATGAGGAGGCATTGGGGCAATCTTTGGGAAGCCCTACTAGTTCTGGGGATTTTGATGTAAATGGGGTTATAGATAGTGTCATAAGTTTTGGAACTGAGAACGCTTTGATTATAGCTGTAGGGTTGGCTATTTTGGGGGTGCCTCTGGTTTTGTCCCAGGTTCTGAACAAGCCTAAGCCATGGGGTGTTGAGTCAGCTAAAAATGCATATGCAAAGCTTGGTGCTGATGGGTATGCTCAGTTGCTTGATATAAGAGCACCAACGGAGTTTAGGCAAGTGGGTGCTCCAGATGTTGGGGGTTTGAAGAAGAAGGCCGTCTCAATCACTTACAAAGCTGATGATAAACCTGGGTTTCTGAAGAAGCTGGCTTTGAAGTTTAAGGAACCAGAAAATACTACATTGTTCATTCTGGACAAATTTGATGGGAACTCCGAATTGGTTGCAGAGTTGGTCACAGTCAATGGATTCAAAGCTGCCTATGCAATTAAGGATGGTGCCGAAGGACCACGAGGATGGATGAGTAGTGGTCTTCCATGGACACCACCAAGGAAAGCTTTGAGCTTGGATCTTGGCAACTTGACAGAGTCTATCACTGGCGCAATAGGAGAGACCACTGATGGCTTGGCTCTAACTCTTGGGATTGCCGCAGCTACTGGTTTGGGGCTCTTAGCTTTTACTGAGATAGAAACAATTCTCCAACTTGTAGGTTCTGCTGCAATTGTTCAGTTTGCAAGCAAGAAGCTTCTATTTGCTGAGGATCGAAAGCAAACCCTGAAACAAGTTGACGAGTTCTTGAATACAAAGGTTGCCCCAAAGGAGCTCCTTGATGAGATAGCGCAAATTGGAAAGGCTCTTCTTCCAACCTCCACCGATAGTAAGGCTCTTCCTGCACCAACAGAGACAACACCAGTACCTGCACCGGCTGCAAGTACTGTGCAGAAATCAGAAGCCTCTCCTGATGCAGTCTCCGAGTCCAAAGTAGATGCAGCAGCTGAGCCTGTTCCTGAAGTAAATTCAGTACCCAAACCTGAAGTTAAGGCAGAATCAGTTCCTGGGATCCAAAGACCACTCTCACCATACCCATATTATCCGGATTTCAAGCCTCCAACATCTCCCACTCCCTCTCAGCCCTAG 1365 0.463 MEALNAATLTPLSVLCDRRKQPRKFSSLPRISVSKVSDSAIFPSKKPSLNGDLPAGLRGGLLLAASVINGGIAKALTYEEALGQSLGSPTSSGDFDVNGVIDSVISFGTENALIIAVGLAILGVPLVLSQVLNKPKPWGVESAKNAYAKLGADGYAQLLDIRAPTEFRQVGAPDVGGLKKKAVSITYKADDKPGFLKKLALKFKEPENTTLFILDKFDGNSELVAELVTVNGFKAAYAIKDGAEGPRGWMSSGLPWTPPRKALSLDLGNLTESITGAIGETTDGLALTLGIAAATGLGLLAFTEIETILQLVGSAAIVQFASKKLLFAEDRKQTLKQVDEFLNTKVAPKELLDEIAQIGKALLPTSTDSKALPAPTETTPVPAPAASTVQKSEASPDAVSESKVDAAAEPVPEVNSVPKPEVKAESVPGIQRPLSPYPYYPDFKPPTSPTPSQP 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0084 454 FunFam Rhodanese-like domain-containing protein 4, chloroplastic 136 267 - -
Lele37g0084 454 MobiDBLite consensus disorder prediction 434 454 - -
Lele37g0084 454 MobiDBLite consensus disorder prediction 381 397 - -
Lele37g0084 454 MobiDBLite consensus disorder prediction 366 454 - -
Lele37g0084 454 Gene3D - 138 268 IPR036873 -
Lele37g0084 454 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 138 258 IPR036873 -
Lele37g0084 454 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 454 IPR044240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0084 Lele-ChrLele37 682258 686297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0084 1 444 Sulfurtransferasese or Rhodanese AT4G01050 57.872 9.62e-160 459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0084 37 682258 686297 Lele37g0084 37 682258 686297 ECH
Lele37g0084 37 682258 686297 Lele39g1344 39 21788816 21795312 hybridization
Lele37g0084 37 682258 686297 Lele40g0087 40 638929 642888 hybridization