Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0069 ATGAGGGCAACCGGAGGATTATCTGAGCAGAAAATCATCACCAGAAGGCTTGGGAGAAATTTGTGCTTTTCTCGTGTGACGCCGAGAGTCGTTAGGATTTCCGTCGCTGACAAGTATGCTACTGATGATTCTTCCAGTGATGAAGACGATAGAGAGGGACGGTTTTCTTCTTCTCGCCCTATGAAGAAGTTCGTCCATGAGATCAGAATCGAAGATTTCTTTAGTTTCATGGTTAACAGGGAAGTGAACGGTGATTCCAGGCCCATTCTGAAGCAGAAGAAGAGGGAGAGGCGACCTGCAATGGCCAGAAGGAAACAGAAACAGAGCCTCCCCAAGGGGAAGAAGTTTCGCGGCGTCCGGCAACGACTGTGGGGGAAATGGGCGGCGGAGATCCGAGACCCGTTTCTGCGAGTTCGGAAGTGGCTCGGCACGTTTGACACGGCGGAGGAAGCTGCTTTGAGGTACGACATAGAAGCCATTCGTCTAAGAGGAGCGGATGCTCTCACAAATTTAATCAAACCGCCAGAGAAACATGAATCTATAGTGTTACCGTTACGCAATCACGAGTCCCAAGGATCAGTGGAGAGTCCTCTGACGAAGAATAGCAAGTGGTTGGAAAATGAGTGTGTTTACGATTCAAGAAAAGAGTCTCACGATTTATTACCGTCTTCGTCTTCCTCGCCGACTTCTGTTCTTAGATACAGTGGGGGAGGGTCCTCTGAACCTGCAGGGTGGGCCGGCATCGAGGAATCCAGAGAAGAAGAAGACGAAAAGTTCTTGTTCCTAGATTCATCATCATCAGAATTCGTATCCTGTTGTTATTCGGATAACGAAACTCCTCTTAGCCCCCCGTTGTTTTTTGAATCCGGCGTGCCACAACTGATTTCTAGCGAGATTCTGAGGGACATTCCATTTCAAGTTGATGATGATTTTGAATCTTCCAAGTGGGTCGTTGATCATTACTTTCAGGATCCTTTACCTCTGAAATAA 990 0.4768 MRATGGLSEQKIITRRLGRNLCFSRVTPRVVRISVADKYATDDSSSDEDDREGRFSSSRPMKKFVHEIRIEDFFSFMVNREVNGDSRPILKQKKRERRPAMARRKQKQSLPKGKKFRGVRQRLWGKWAAEIRDPFLRVRKWLGTFDTAEEAALRYDIEAIRLRGADALTNLIKPPEKHESIVLPLRNHESQGSVESPLTKNSKWLENECVYDSRKESHDLLPSSSSSPTSVLRYSGGGSSEPAGWAGIEESREEEDEKFLFLDSSSSEFVSCCYSDNETPLSPPLFFESGVPQLISSEILRDIPFQVDDDFESSKWVVDHYFQDPLPLK 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0069 329 MobiDBLite consensus disorder prediction 216 245 - -
Lele37g0069 329 Pfam AP2 domain 115 164 IPR001471 GO:0003700|GO:0006355
Lele37g0069 329 SUPERFAMILY DNA-binding domain 115 171 IPR016177 GO:0003677
Lele37g0069 329 MobiDBLite consensus disorder prediction 93 113 - -
Lele37g0069 329 ProSiteProfiles AP2/ERF domain profile. 115 172 IPR001471 GO:0003700|GO:0006355
Lele37g0069 329 MobiDBLite consensus disorder prediction 220 236 - -
Lele37g0069 329 CDD AP2 114 170 IPR001471 GO:0003700|GO:0006355
Lele37g0069 329 PRINTS Ethylene responsive element binding protein signature 138 154 IPR001471 GO:0003700|GO:0006355
Lele37g0069 329 PRINTS Ethylene responsive element binding protein signature 116 127 IPR001471 GO:0003700|GO:0006355
Lele37g0069 329 MobiDBLite consensus disorder prediction 87 113 - -
Lele37g0069 329 Gene3D AP2/ERF domain 114 172 IPR036955 GO:0003700|GO:0006355
Lele37g0069 329 SMART rav1_2 115 178 IPR001471 GO:0003700|GO:0006355
Lele37g0069 329 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 27 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0069 Lele-ChrLele37 600817 601806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0069 8 242 AP2-EREBP Transcription Factor Family AT4G27950 39.271 3.31e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele37g0069 AP2 9.9e-10 CL0081