Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0050 ATGGTGTCGTTAAATCCGAACCCAGCTCAAGGCTTCTACTTCTCCGATCCCACCAAGATGGGGCTTCCCGGTGTCAATCCTACGCCGCCGCCGCCGCCTCCGGCTACTGCTACGGCTTCTTCGTCCCCTTCCAGCACCGTAGGCGTCAGTACGGCTTCGTACGGGGAGGATCTGAGTAAGAAGATCCGAAAACCATACACGATTACCAAGTCCAGGGAGAGCTGGACGGAGCAGGAGCACGACAAGTTTCTCGAAGCTCTCCAATTATTTGACCGTGATTGGAAGAAGATTGAAGCATTTGTTGGCTCAAAAACTGTTATCCAGATACGAAGTCATGCACAGAAGTATTTCCTGAAAGTTCAGAAGAATGGAACAAGTGAACATGTGCCTCCCCCTCGGCCAAAAAGAAAGGCTGCTCATCCATACCCACAAAAGGCACCTAAAAATGCTCCAGCGGTATCCCAAGTTACAATGCCATTGCAATCTTCATCTTCTTTCATGGAGCCCTCATACATTCATTGGCCCGATGCATCATCTGCACTTGGAACTCCAGTTACCAGTGTGCCTGTGTCAAATTGGAATTGTAATGTTGTCCCACTACCCAGCTTGCCACAAGGGAATAGAGATGAGATGGGATTGCCTGGTCAAGCTGCTTCTCTAAATTGTTGCTATAGCAGTAGTAATGAGAGCACTCCAAGGGCTTGGCCAGGTAGCAAAGTTATTGATCAAGGGAACTCAGGCAAGCCGATGAAAGTAATGCCAGATTTTGCACAAGTCTACAGCTTTATTGGTAGTGTGTTTGATCCAAATGCATCAAATCACTTGGAGAGACTGAAACAGATGGACCCAATAAATGTGGAAGCAATCAAGTCAGACCTGTTCCCTAGTAGATGCTATTGTTCTCTTGAACCTTTTGAAATTAATGCAGAGAAGGTTGCTTTCTTCCTACGAGCCTGGCTTTTAGAAGGTGAAGTCTGGTAA 981 0.4709 MVSLNPNPAQGFYFSDPTKMGLPGVNPTPPPPPPATATASSSPSSTVGVSTASYGEDLSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNAPAVSQVTMPLQSSSSFMEPSYIHWPDASSALGTPVTSVPVSNWNCNVVPLPSLPQGNRDEMGLPGQAASLNCCYSSSNESTPRAWPGSKVIDQGNSGKPMKVMPDFAQVYSFIGSVFDPNASNHLERLKQMDPINVEAIKSDLFPSRCYCSLEPFEINAEKVAFFLRAWLLEGEVW 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0050 326 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 70 119 IPR006447 GO:0003677
Lele37g0050 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Lele37g0050 326 SMART sant 71 119 IPR001005 -
Lele37g0050 326 Pfam Myb-like DNA-binding domain 72 117 IPR001005 -
Lele37g0050 326 MobiDBLite consensus disorder prediction 23 38 - -
Lele37g0050 326 Gene3D - 75 122 - -
Lele37g0050 326 ProSiteProfiles SANT domain profile. 70 123 IPR017884 -
Lele37g0050 326 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Lele37g0050 326 MobiDBLite consensus disorder prediction 1 54 - -
Lele37g0050 326 PANTHER SWI/SNF COMPLEX-RELATED 38 289 - -
Lele37g0050 326 CDD SANT 74 117 IPR001005 -
Lele37g0050 326 SUPERFAMILY Homeodomain-like 66 122 IPR009057 -
Lele37g0050 326 MobiDBLite consensus disorder prediction 122 153 - -
Lele37g0050 326 FunFam protein REVEILLE 6 isoform X1 74 122 - -
Lele37g0050 326 MobiDBLite consensus disorder prediction 39 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0050 Lele-ChrLele37 428984 433039 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele37g0050 Myb_DNA-binding 2.7e-11 CL0123