Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0049 ATGGCTAGTCCTTCGCTTCTCCAGTCCTCCACGTCGTCGTTTCTGGGTCAATTTCGAGTCTTTCCGGCTCCATTGTCATCCGGACTTCTCTACAGAAATGGGAATGGTTGCGCGGTGGCGCCGGTGAAGGCCACTGCTTCTGAGTCCGGGGTTGTATTGGTGGAGAAGTCTGAGGCAGAGAAGCCCCACCGGCTCAAAATAACTTACACTGAGAAAATCGTTCCTTTGCTCATGGAAGAATTCAACTACACCAATATACACGAGGTCCCTAAAATTGAGAAGGTCGTGGTTAATTGCGGTATCGGAGATGCTGCACAAAATGCAAAGGGTTTGGAGGCAGCAATGAATGATCTAGCACTCATCACAGGACAGAGGCCTGTTAAGACACGAGCGAGGGCTTCAGTTGCCACCTTCAAGATCAGGGAAGGCCAACCCCTTGGGATTGCTGTGACACTCAGAGGAAAAATGATGTTCTCATTCCTAGACCGACTTGTCAACTTGGGGCTTCCTAGGACGAGAGATTTCCAAGGTGTCAACCCCAACAGTTTCGATGGACACGGGAATTACAGCGTCGGCATCAAGGACCAGAGCGTGTTCCCAGAAATCAGGTCTGATATCGTGAGTAAGCCTAGAGGAATGGACGTATGCATAACAACAACGGCGAAAACTGATCAAGAAGCAAGCAGATTACTGGTTCTTATGGGCATGCCCTTCAGAGAGGGTGGTGGTCCTGCTTCAACAATTCGCAAGAAGAAGCTCAAGTCTCACCATTTTGATTCAAAGTCAAAGGGCAGAGGAAGGAGGTGA 807 0.4944 MASPSLLQSSTSSFLGQFRVFPAPLSSGLLYRNGNGCAVAPVKATASESGVVLVEKSEAEKPHRLKITYTEKIVPLLMEEFNYTNIHEVPKIEKVVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARASVATFKIREGQPLGIAVTLRGKMMFSFLDRLVNLGLPRTRDFQGVNPNSFDGHGNYSVGIKDQSVFPEIRSDIVSKPRGMDVCITTTAKTDQEASRLLVLMGMPFREGGGPASTIRKKKLKSHHFDSKSKGRGRR 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0049 268 FunFam 50S ribosomal protein L5 60 240 - -
Lele37g0049 268 Gene3D - 56 240 IPR022803 -
Lele37g0049 268 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 68 241 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lele37g0049 268 Pfam Ribosomal protein L5 85 141 IPR031310 -
Lele37g0049 268 MobiDBLite consensus disorder prediction 249 268 - -
Lele37g0049 268 Pfam ribosomal L5P family C-terminus 145 238 IPR031309 -
Lele37g0049 268 SUPERFAMILY RL5-like 64 239 IPR022803 -
Lele37g0049 268 ProSitePatterns Ribosomal protein L5 signature. 118 134 IPR020929 GO:0003735|GO:0005840|GO:0006412
Lele37g0049 268 Hamap 50S ribosomal protein L5 [rplE]. 62 240 IPR020930 GO:0003735|GO:0005840|GO:0006412
Lele37g0049 268 MobiDBLite consensus disorder prediction 241 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0049 Lele-ChrLele37 422806 425009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0049 91 218 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 27.344 1.63e-06 45.8