Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0047 ATGTCAGTGTACGATGCAGCTTTCGTGGATACAGAGCTCTCCAAGAAGACCTCAATCTTTGGTCTCCGACTATGGGTTGTGATTGGAATCCTCGTCGGTTCTATTATCGTGCTCACTCTCTTCCTGCTCTCGCTCTGCCTCACCTCTCGCCGCCAGAGACGTAAAGAAAACCCTCAAGCCAACAAAACCACTATCGTTTCGAAGGAAATCAAGGAGATCGTGCACCTGCCCTCACCCAATCAGCACTCAGCCCCCGAGATCCAAGTGGATTTCGGGAAAGCGGAGCACCGGGTCGTGGTTTACTCCGATCGGGTCTCTAGTGGAGAGAGCAAGGGAGGCGCCGCCAGTGTGTATGAAACGACGTCCTCTTTTGGGAGTGGGAGTATTGGGCCTGAGGTTTCGCATCTTGGGTGGGGAAGATGGTACACCTTAAGGGAGCTGGAGGCTGCAACTAACAATCTGTGTGAGGAGAATGTTATTGGGCAAGGTGGATACGGCATCGTTTACCATGGAGTGCTCGGTGATGGTACCAGAGTTGCAGTGAAGAACCTTTTGAATAACAAGGGTCAAGCTGAGAGAGAATTTCAAGTAGAGGTAGAAGCAATTGGTCGTGTGCGCCACAAGAATCTTGTTAGGTTGCTTGGCTACTGTGTTGAGGGGGCATACAGGATGCTTGTGTATGAGTATGTTGATAATGGCAATTTGGAACAGTGGCTTCATGGGGATGTTGGAGCTGTCAGCCCTTTGACATGGGATATCCGCATGAACATTATATTGGGAACTGCAAAGGGATTGGCCTATCTTCACGAGGGTCTTGAACCGAAGGTTGTCCACAGAGATGTGAAATCTAGCAACATACTCCTTAATAGGCAATGGAACGCCAAGGTTTCAGATTTTGGACTTGCAAAACTCTTGTGTTCTGAGCGGAGTTATGTCACCACCCGAGTAATGGGGACATTCGGTTACGTTGCTCCAGAATATGCCTGCACTGGTATGTTGACTGAGAAGAGCGATGTTTATAGCTTTGGAATACTCATCATGGAGATAATTACTGGGAGAAGTCCTGTTGATTATAGCAGGCCACAAGGAGAGGTAAATCTAGTAGAGTGGTTGAAAGCAATGGTTGGGAATCGAAAATCTGAGGAAGTAGTTGATCCTAAGCTCCTTGAGATGCCATCTTCAAAGGCTCTGAAGCGTGCTCTATTGGTTGCTCTTCGATGTGTTGATCCTGATGCAACAAAAAGGCCTAAAATGGGACATGTGATCCACATGCTTGAGGCAGACGACCTCTTGTTCCGTGATGAACGCCGGATTGGAGGAGAGTCTTCCAGCAACTCTCATCGTGGTGATCCCATACAAGAGCATAAGGACTCAAATTCTGATAAAAAGCTTGTAGGCAGAGGTACCACTAATCAAACGCAAGATGATTATGGTAGGAGTCAGCATCAAACCAGTAGGTGA 1461 0.4784 MSVYDAAFVDTELSKKTSIFGLRLWVVIGILVGSIIVLTLFLLSLCLTSRRQRRKENPQANKTTIVSKEIKEIVHLPSPNQHSAPEIQVDFGKAEHRVVVYSDRVSSGESKGGAASVYETTSSFGSGSIGPEVSHLGWGRWYTLRELEAATNNLCEENVIGQGGYGIVYHGVLGDGTRVAVKNLLNNKGQAEREFQVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGAVSPLTWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLNRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPQGEVNLVEWLKAMVGNRKSEEVVDPKLLEMPSSKALKRALLVALRCVDPDATKRPKMGHVIHMLEADDLLFRDERRIGGESSSNSHRGDPIQEHKDSNSDKKLVGRGTTNQTQDDYGRSQHQTSR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0047 486 CDD STKc_IRAK 160 426 - -
Lele37g0047 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Lele37g0047 486 ProSiteProfiles Protein kinase domain profile. 154 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0047 486 MobiDBLite consensus disorder prediction 439 486 - -
Lele37g0047 486 Gene3D Phosphorylase Kinase; domain 1 130 229 - -
Lele37g0047 486 SUPERFAMILY Protein kinase-like (PK-like) 132 426 IPR011009 -
Lele37g0047 486 FunFam Putative receptor-like serine/threonine-protein kinase 230 439 - -
Lele37g0047 486 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
Lele37g0047 486 FunFam Probable serine/threonine-protein kinase At1g01540 134 229 - -
Lele37g0047 486 PANTHER OS01G0323000 PROTEIN 8 452 - -
Lele37g0047 486 Gene3D Transferase(Phosphotransferase) domain 1 230 437 - -
Lele37g0047 486 SMART serkin_6 154 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0047 486 MobiDBLite consensus disorder prediction 464 486 - -
Lele37g0047 486 Pfam Protein tyrosine and serine/threonine kinase 157 425 IPR001245 GO:0004672|GO:0006468
Lele37g0047 486 MobiDBLite consensus disorder prediction 439 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0047 Lele-ChrLele37 409735 411891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0047 126 426 Receptor kinase-like Gene Family AT4G02010 47.869 1.09e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele37g0047 PK_Tyr_Ser-Thr 2.6e-46 CL0016