Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0042 ATGCCTTTCAATTCGATTCTTTGCTCTAATCCCAATCTGATTCTTAGTATTTTGTCGCTCTTTTCTTTCTCATTTGGTCTATGCTTTGCGAGTGATCAACTGGAAGTTGGCGACAGCTTCACTGTTTCCAGCTTCAGCTACCCAGAGACCATGCTCAGGCCCTTTGATTTGCGATATATCAGAGGTAGTGACTCTTCTGTTGATATGCTCAATTTCTCCGTTCTTCTAGCGTTATCGCTGAGTTCTAGAGAAATAGGAGATTCTAGCTGGATTACTTTCAATTCACACAATGGCTTGCGTGTGCAGATAGTCATTCGTTGTCACAGAATTTCAGAAAATTTAAATGTACCTTTCTTTTTGGTTTCTTGTCTAGCATTGCACTCAGATGTAGACCTTGTAAAATGCTGCCATCTATGTAAGATGGCTGTTACTTTTAATGAAATTCTGTTTCTTCAGTTTTGTCTGTTTGATGTCACAAAAGAGGAAAAGGTTCCACAAAGCATGCTGCCAGTAGCATGTTTTAGAGATGGCAGCCCTCCACTGCCTGATGCCTCAAATATTCCCCGGAAAGAGCCAACCATCTCAGGAATGAATAATCATTTTGTGGAGCAGTGTTTTCCCATGCAGAAAAGTATTACTTTGAGATTGACAAACGAGCAGATATCTCCAGGTGTTTGGTACATTGGTCTTTTCAATGGGATTGGACCTGCTAGGACACAGTCAAAAATGATTATCCGAGGTCCATCTTACTCCTTTAGGGCCAATATAAGTGTCGACGCATGCACTAATACGATGATGATGGGGGAGTTCGGCAACAGTACAGTCTATCCTCTCTCATGCACATGGCCTGATGACGTCTTTGACGCTTCTGATGATGTGGCTGTCAAGCCAATGATGGAAAATGTAATGACATGCAGAAATAAATTTGAAAATTTATGTGTTCAGGATGGTGAAGCAAAAGTCTACTCCTTGGATATAATGAATATGGTGGAAGAGTTGAGCATTATGGCCACAAATGTCAGTTTCAATTCCATTTCATCAACTAATGACGCAAATGATGTCAATCTAATGTGTTTTGTTCTCCATGGAGCAATGCCTTCTGCGACTTTGCATGATTATTCCAGTAATTTATATGAAGTTCCTTTGACTATACGATCACCACTGATTGGTCGTTGGTACATTATCATAGTACCACTTAATCTTACAAGAAAAACTGGAGACGCTGCGGATAGTGATGTAAGAACCTGCTATTCAATGGAATCACAATTGTCTGAATGCCCATTTAGAAAAGCTGGACCAAATTGCACAATGGCAAGGTACAAACTTCAGACGGTTCTAGGCAGAGGTATAAGCCCCTTTGAATCATATTATTTACCAATTGGTGGAGAAGTGTACTCTGATTCTGCCAAGTTTCCTATTGAACCACTTTTAAGCAGCTCATCAAATGGCGGGGGGCCCGACAACGTATGGACTATATTCCTCGTGGTGAGGCCGGAGGAAATATCCACATACATCTACCCTCAAATGCGAAGATCGGTTACGAGACCTTCATGTCTCTTTCACTCGAACGATGTCCAAATCGATGCTCCTCTCATGGAAGCTGTAAATTCTCATTTGATGCTACTGGATTGGCATCATACAGCTTTTGCTCCTGTGACCGAGACCATGGAGGCTTTGACTGTGGCATTTGAATTAGTATCACATAAAGGGCATATAAGGCAATCGATTTTTCTCATTGCATCAAATGCTGCAGCCATACTTCCTGCTTTTTGGGCCCTTCGGCAGAAGGCGTGGGCAGAGTGGATTATATACACAGCTAGTGGAATTTCAAGTGGATTATATCATGCTTGTGATGTTGGCGCCTGGTGTGCATTGAACTACAATGCCTTACTGGTTACATATATGCTTCCACTGTTAACTCGTGTTTCGAGGATGTTCATGGACTTCTGGCTCTCTTTCATGGCTGTGATTAGCACTTTATTATACCTAGCTACCATTAGTGAGGCCTTTAAGAGGGCAATTCATACTGCTGTGGCCATCCTTACAGCTCTCATGGCTGTTTCCAATGCAACCATATCTTCGAATATTATTCTTGTGATAGTAATTGGGACTATTGGCCTTCTGATTGGATGGTTGATAGAGCTCTCAGCTAAGTATAGGTCCCTTTCCTTCTCATTTGAAGTCCTGTCGAATTTCCGTCAGAGTTTGCAAGCTATAAAGCAATGGCTCTATAATCTTGTCGAGACACTTCTGAGACGGTTCCGGTGGGGTTTTGTGCTCGCCGGTTTCGCGGCATTGGCCATGGCAGCAACAAGCTGGACACTTGAAACCAGTGAAACCTACTGGTTTTGGCGATTTGAGTGTAAATGGAAAGGATTGGTAATTGGATTGTCCTCCTTCTTTCTCAAACTATTGGCTTGTGTAGTATCCACTGGCGCGCAAGTTTGCATAAGGGTTTGTTCTGTGAATTTCGGAACTGAATTCCATCGCCTGGTTTCGCTGTTTGATCCTTTTCTTGCTTTATTTCTTGGGTTATTCATTTTCTTCTTGTTGCTTGAGTTTTCTGTATCGCGGTGCTATAAACAGCTGCACTGCTGGAAAATGGGGAGCTGCTGCTGTTCTGCCAGAAAACCTCATCTACATGGCACACCAGGGTATTATTATTGCCCGCCAGCTTTGGAAGAGCGCGAATCATTAACCTTGAATGATGGTACGGCTGCTTCACTCGGTGCTGGATTCCTAGCAGGTTTGAACTTGGAAACATCCACGCCAGATACATACCGGCCCCCTCCTGCACCTTTGCCATATGATGTGGTCTTTGGTCCAATATCAACAGATTCTGAATCTGGAAGAAAAACAGGTAGTGGTAGTAGTATTGAAACATTAATTACGTGTGAAGATCTTGAAGAATCGGATTGCAAAGCTCAAGCAAATTCTGAACTTTTATCTCCAAAAAAGATAGAACTATCAAAGTCAAATGAATGCCATGTATTAATGACAGAAGAAGAAGTCTGTCCAATTTGTCTTGAAGAATATGAGGTTGAGAATCCTAAAACTCTGACAAAGTGTGAACATCATTTTCACCTATCTTGCATTCTTGAGTGGATGGAAAGAAGTGACACCTGTCCTATATGTGATCAGGAGATGATATTTGAGTAAGGTTCCATTACTGGTTACTGGGGGGAGAAGAACGAGATTTTGACAGTGTTCCCCCATATGGGAATTCTCGTATCAATGAAAGAATTCCGCAAATGCTCAGGAGGCAGAGATTCTTTCCTCAGCATCCTTGCAATCCAACACTTAGAGAAAGGATCATTTAATATATCTGCCAAGATAGGGATCGATACAGAGAATGGGTCACTCAAAATGGCAGAGGAGAGAATGAGTTCATCCTCTGGTGAAGAGAGTGAGCCACCAATGACCAATGGCAGCACCAACTTGGAGACGGCGGAGCTCCACCATGCTCCGGCGGGTCTGATTCAGACGAATGCAGCAGATTATCCTCCAATAAATACCTTCCAAGACGTGAAATATGTGTGCTCTGTGGAAACCGCAAAGGTTTGGGCTATTGCAGGCCCTATCGCTTTTAACATCCTCTGCAATTATGGCATCAATTCTTTCACCAACATCTTCGCAGGACATATTGGAGAGATAGAATTATCTGCTGTAGCCATTGCTCTCTCCGTCGTTTCAAACTTCTCTTTCGGCTTCTTGCTTGGCATGGGAAGTGCACTGGAGACCTTATGCGGGCAAGCATTTGGAGCAGGGCAAGTAGAAATGCTAGGAGTATACATGCAGCGTTCGTGGATAATCCTAGGAGCCGCATGTTTCTTTCTGCTTCCTCTTTACATCTTTGCTAAGCCAATTCTGATCCTGCTAGGCCAAGAACATGACATTGCAGTTCTAGCAGGAACATTCACGGTCCAAACAATCCCTCAAATGTTCTCTCTTGCTATCAACTTCCCTACCCAGAAGTTCCTGCAAGCACAGAGCAAAGTGGGAGTTCTTGCTTGGATTGGCTTCGCCGCGGTTTTCTTTCATATCGGGATCCTCTATCTGTTCATCAGAGTTCTTGGTTGGGGCACAAGTGGTGCTGCTGCAGCCTATGATATATCTGCTTGGGGGATTGCTTTGGCTCAAGTGGCTTATGTGGTTGGTTGGTGCGATGAAGGTTGGAGAGGCTTTTCATGGCTCGCTTTTAAGGATCTTTGGGCATTTGTCAAGTTGTCCATTGCCTCTGCTATCATGCTTTGTTTGGAGATTTGGTACTTCATGACCATTATTGTTCTCACCGGTCACCTTGACAAACCAGTTATCGCCGTTGGCTCGCTTTCTATATGCATGAATGTGAATGGGTGGGAAGGCATGCTGTTCATAGGGATCAATGCAGCTATAAGTGTGAGGGTTTCTAATGAGCTAGGATCAGGACACCCAAGAGCTGCGAAGTTCTCAGTCATCGTCACGGTGATCGAGTCCCTGTTGATAGGGATCCTTTGTGGAGCCATTATTCTGATCACAAAAGATGATTTTGCTGTCATCTTCACTGACAGTGCAGAGATGAAGAAAGCAGTTTCTCATCTTGCTTCCCTTCTTGGCGCAACCATGGTTCTAAATAGTGTTCAACCAGTTATATCAGGTGTTGCTGTAGGAGGAGGTTGGCAGGCTTTGGTAGCTTACATAAACCTATTCTGTTATTACATAATTGGACTCCCCCTTGGCTTTCTTCTTGGTTACAAATTGGGTTTAAGAGTAGAGGGCATTTGGATAGGCATGATATGTGGGACATTGTTGCAGACAATGATATTGTTGTACATTATATATAAAACTAACTGGAATGAAGAGGTGGAACAAGCAACAGAAAGAATGAGAAGATGGACTGGACAAGAATTTGAACTTGCTTCCTCATAA 4908 0.4313 MPFNSILCSNPNLILSILSLFSFSFGLCFASDQLEVGDSFTVSSFSYPETMLRPFDLRYIRGSDSSVDMLNFSVLLALSLSSREIGDSSWITFNSHNGLRVQIVIRCHRISENLNVPFFLVSCLALHSDVDLVKCCHLCKMAVTFNEILFLQFCLFDVTKEEKVPQSMLPVACFRDGSPPLPDASNIPRKEPTISGMNNHFVEQCFPMQKSITLRLTNEQISPGVWYIGLFNGIGPARTQSKMIIRGPSYSFRANISVDACTNTMMMGEFGNSTVYPLSCTWPDDVFDASDDVAVKPMMENVMTCRNKFENLCVQDGEAKVYSLDIMNMVEELSIMATNVSFNSISSTNDANDVNLMCFVLHGAMPSATLHDYSSNLYEVPLTIRSPLIGRWYIIIVPLNLTRKTGDAADSDVRTCYSMESQLSECPFRKAGPNCTMARYKLQTVLGRGISPFESYYLPIGGEVYSDSAKFPIEPLLSSSSNGGGPDNVWTIFLVVRPEEISTYIYPQMRRSVTRPSCLFHSNDVQIDAPLMEAVNSHLMLLDWHHTAFAPVTETMEALTVAFELVSHKGHIRQSIFLIASNAAAILPAFWALRQKAWAEWIIYTASGISSGLYHACDVGAWCALNYNALLVTYMLPLLTRVSRMFMDFWLSFMAVISTLLYLATISEAFKRAIHTAVAILTALMAVSNATISSNIILVIVIGTIGLLIGWLIELSAKYRSLSFSFEVLSNFRQSLQAIKQWLYNLVETLLRRFRWGFVLAGFAALAMAATSWTLETSETYWFWRFECKWKGLVIGLSSFFLKLLACVVSTGAQVCIRVCSVNFGTEFHRLVSLFDPFLALFLGLFIFFLLLEFSVSRCYKQLHCWKMGSCCCSARKPHLHGTPGYYYCPPALEERESLTLNDGTAASLGAGFLAGLNLETSTPDTYRPPPAPLPYDVVFGPISTDSESGRKTGSGSSIETLITCEDLEESDCKAQANSELLSPKKIELSKSNECHVLMTEEEVCPICLEEYEVENPKTLTKCEHHFHLSCILEWMERSDTCPICDQEMIFEXGSITGYWGEKNEILTVFPHMGILVSMKEFRKCSGGRDSFLSILAIQHLEKGSFNISAKIGIDTENGSLKMAEERMSSSSGEESEPPMTNGSTNLETAELHHAPAGLIQTNAADYPPINTFQDVKYVCSVETAKVWAIAGPIAFNILCNYGINSFTNIFAGHIGEIELSAVAIALSVVSNFSFGFLLGMGSALETLCGQAFGAGQVEMLGVYMQRSWIILGAACFFLLPLYIFAKPILILLGQEHDIAVLAGTFTVQTIPQMFSLAINFPTQKFLQAQSKVGVLAWIGFAAVFFHIGILYLFIRVLGWGTSGAAAAYDISAWGIALAQVAYVVGWCDEGWRGFSWLAFKDLWAFVKLSIASAIMLCLEIWYFMTIIVLTGHLDKPVIAVGSLSICMNVNGWEGMLFIGINAAISVRVSNELGSGHPRAAKFSVIVTVIESLLIGILCGAIILITKDDFAVIFTDSAEMKKAVSHLASLLGATMVLNSVQPVISGVAVGGGWQALVAYINLFCYYIIGLPLGFLLGYKLGLRVEGIWIGMICGTLLQTMILLYIIYKTNWNEEVEQATERMRRWTGQEFELASS 1635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0042 1635 ProSiteProfiles Zinc finger RING-type profile. 1005 1046 IPR001841 -
Lele37g0042 1635 Pfam Protein of unknown function (DUF3522) 571 784 IPR021910 GO:0016020
Lele37g0042 1635 Pfam Ring finger domain 1005 1045 IPR001841 -
Lele37g0042 1635 CDD MATE_eukaryotic 1183 1617 IPR045069 GO:0042910|GO:1990961
Lele37g0042 1635 TIGRFAM matE: MATE efflux family protein 1193 1588 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele37g0042 1635 SMART ring_2 1005 1045 IPR001841 -
Lele37g0042 1635 Pfam MatE 1413 1575 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele37g0042 1635 Pfam MatE 1193 1353 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele37g0042 1635 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 998 1055 IPR013083 -
Lele37g0042 1635 SUPERFAMILY RING/U-box 996 1052 - -
Lele37g0042 1635 FunFam Putative E3 ubiquitin-protein ligase RHB1A 982 1050 - -
Lele37g0042 1635 PANTHER MULTIDRUG RESISTANCE PROTEIN 1178 1611 - -
Lele37g0042 1635 Coils Coil 1608 1628 - -
Lele37g0042 1635 MobiDBLite consensus disorder prediction 1125 1146 - -
Lele37g0042 1635 CDD RING-H2_EL5_like 1004 1045 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0042 Lele-ChrLele37 367227 380878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0042 868 1052 C3H Transcription Factor Family AT4G00335 56.684 1.48e-67 224