Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0023 ATGGATCGAGGGGACCATATGGCATCTTACTATATGCAGAGAGGGCTAGGTGGTGGTGGAGCACAAGCTGAGTTACATGGTTCCTCTGGTATTCGTCCCCTCTCGAATCCCAATCTGCCATTTCAACCTGGCATTGGAGGAGGAGGCGGCGGTGGCAGCATTGGATCCACATTGGCTGTAGAATCTTCAGCAATTTCACCTCATGGTGTCAATGTGGGTGCTCCTCCTGGTGCACCGCCGGGAGAACCTTTCAGAAGGAAGAGAGGAAGGCCTAGGAAATATGGTCCAGATGGAAGTGTATCGTTGGCCTTGACTCCATCATCGTCCGGTCATCCCAGCGGAGCATTGACACAAAGCCAGAAGCGAGGCAGAGGCCGTCCTGCGGGATCTGGAAAGAAACAGCAGTTGGCCTCTCTTGGTGAATTGATGTCTGGTTCAGCAGGAATGGGCTTTACTCCTCATATCATCACCATTGCAGTTGGAGAAGACATTGCAACGAAAATAATGGCATTTTCTCAGCAAGGACCTAGAGCCGTATGCATTTTGTCAGCAAACGGTGCTGTCTCCAATGTGACGCTTCGACAGCCTTCAAGTTCGGGTGGCACTGTCACATACGAGGGGCGTTTCGAGATATTGTGCCTATCAGGCTCATATTTGCTCACAGAAAGTGGTGGCTCTTGCAATCGAACTGGTGGTCTTAGTGTTTCGCTGGCTAGTCCTGATGGCCGTGTCATTGGTGGTGGTGTTGGCGGATTGCTGATTGCAGCGAGTCCTGTTCAGGTGATAGTTGGGAGCTTCATGTGGGGTGGATCAAAGACCAAGAGCAAGAAAAAGGAGGTTGCAGAAGAAGCAGAAGTAGCCATGGAATCGGATCATCATCATCATCATCATAGTCAACAACAACAAGCGGCTCATAATCCATCTGCAATGAACAGCCTTTCACCTAATCAAAATCTCACGCAAGCTTCATCTATGAGTTCCTGGCCGGCTGCTTCTCGTCAATTGGACATGCGTGGGTGA 1020 0.5039 MDRGDHMASYYMQRGLGGGGAQAELHGSSGIRPLSNPNLPFQPGIGGGGGGGSIGSTLAVESSAISPHGVNVGAPPGAPPGEPFRRKRGRPRKYGPDGSVSLALTPSSSGHPSGALTQSQKRGRGRPAGSGKKQQLASLGELMSGSAGMGFTPHIITIAVGEDIATKIMAFSQQGPRAVCILSANGAVSNVTLRQPSSSGGTVTYEGRFEILCLSGSYLLTESGGSCNRTGGLSVSLASPDGRVIGGGVGGLLIAASPVQVIVGSFMWGGSKTKSKKKEVAEEAEVAMESDHHHHHHSQQQQAAHNPSAMNSLSPNQNLTQASSMSSWPAASRQLDMRG 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0023 339 Gene3D - 153 297 - -
Lele37g0023 339 ProSiteProfiles PPC domain profile profile. 147 287 IPR005175 -
Lele37g0023 339 SUPERFAMILY AF0104/ALDC/Ptd012-like 151 268 - -
Lele37g0023 339 MobiDBLite consensus disorder prediction 273 339 - -
Lele37g0023 339 Pfam Plants and Prokaryotes Conserved (PCC) domain 153 266 IPR005175 -
Lele37g0023 339 MobiDBLite consensus disorder prediction 273 297 - -
Lele37g0023 339 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 73 317 IPR039605 GO:0003680
Lele37g0023 339 MobiDBLite consensus disorder prediction 301 331 - -
Lele37g0023 339 CDD DUF296 152 266 IPR005175 -
Lele37g0023 339 MobiDBLite consensus disorder prediction 101 124 - -
Lele37g0023 339 FunFam AT-hook motif nuclear-localized protein 1-like 153 284 - -
Lele37g0023 339 MobiDBLite consensus disorder prediction 15 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0023 Lele-ChrLele37 205564 210112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0023 1 337 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 48.870 8.29e-81 248