Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele37g0017 | ATGAACAATAGAGCAAGATACCCACCCGGGATTGGTGTAGGCCGAGGAGGTGTGAACTCGAACGATGCTTTTCAGCCAAGACACCCTCATCAACAACAGTACGTGCCGAGGCATTTGTTACCGCAGCATCAACAGTATCATCATCATCAACATCAGCAACAATATCAGCAGCAGCAGCAGAATCAACACCATCACCACCAACAACAACAGTGGCTTAGACGGACGCACCTGGGTGCTGCTGATTCCAATGTGGTTGACGAGGTCGAGAAGACTATTCAGTCTGAAGCCGTTGACCCAAGTTCACAAGATTGGAAGGCAAGGTTAAAGGTACCACCACCTGATACGCGCTATAGAACAGAGGATGTAACAGCAACTAAAGGAAATGAATTTGAGGACTATTTTTTGAAGCGTGAGCTGCTTATGGGAATATATGAGAAGGGTTTTGAAAGGCCTTCTCCTATTCAGGAAGAAAGTATACCAATTGCACTTACTGGCAGTGACATTCTTGCTAGGGCTAAGAATGGAACGGGAAAAACAGCTGCCTTTTGCATTCCTGCATTGGAAAAAATTGACCAGGATAACAATGTTATTCAAGCCGTTATACTGGTCCCAACACGAGAGTTGGCCTTGCAAACATCTCAAGTGTGCAAAGAGTTGGGAAAACATTTGAAAATTCAAGTTATGGTTACTACAGGTGGTACCAGCCTGAAGGATGATATTATGCGGTTATATCAGCCAGTTCATTTACTAGTTGGAACACCAGGACGAATATTAGATCTTGCGAAAAAGGGTGTTTGTGTTTTGAAAGATTGCAATATGCTTGTTATGGATGAGGCTGATAAGCTCCTCTCCCCAGAGTTCCAGCCTTCAATAGAGCAGTTGATTCATTTCCTGCCTACAAATCGTCAAATATTGATGTTTTCAGCCACTTTTCCTGTCACTGTTAAGGACTTTAAAGATAGGTATCTTAAAAAGCCTTACGTTATTAACCTTATGGACGAGTTGACTTTGAAAGGTATAACACAATTTTATGCGTTCGTGGAAGAGAGACAGAAAGTCCACTGTTTGAACACACTTTTCTCTAAGCTGCAAATAAACCAGTCAATTATTTTCTGCAATTCAGTGAATCGAGTTGAGCTCCTTGCCAAGAAAATAACAGAACTTGGGTATTCATGTTTCTATATTCATGCGAAGATGTTGCAAGATCATCGCAATAGAGTATTTCATGATTTCCGCAATGGTGCATGTAGGAATCTCGTTTGTACTGATCTTTTTACTAGAGGAATAGACATTCAAGCTGTCAATGTTGTCATTAATTTTGATTTTCCGAAGAACTCAGAAACTTACCTGCACAGGGTTGGTCGATCAGGGAGGTTTGGACACCTTGGTTTAGCCGTGAACTTGATTACTTATGAAGACCGCTTTAATTTGGTTGCCTTTGCATTTGTGGTGGATGTGGCTGTTCAATTTGTAGTAAAGCATGAGAGGAGATGCAGTATGAGAATTTGGTTATTGTGGGACTGTGGGGAATGA | 1533 | 0.4168 | MNNRARYPPGIGVGRGGVNSNDAFQPRHPHQQQYVPRHLLPQHQQYHHHQHQQQYQQQQQNQHHHHQQQQWLRRTHLGAADSNVVDEVEKTIQSEAVDPSSQDWKARLKVPPPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQAVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCNMLVMDEADKLLSPEFQPSIEQLIHFLPTNRQILMFSATFPVTVKDFKDRYLKKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLVAFAFVVDVAVQFVVKHERRCSMRIWLLWDCGE | 510 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele37g0017 | 510 | MobiDBLite | consensus disorder prediction | 1 | 72 | - | - | |
Lele37g0017 | 510 | CDD | DEADc_DDX6 | 130 | 330 | - | - | |
Lele37g0017 | 510 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 | 60 | 477 | - | - | |
Lele37g0017 | 510 | MobiDBLite | consensus disorder prediction | 93 | 119 | - | - | |
Lele37g0017 | 510 | Gene3D | - | 333 | 494 | IPR027417 | - | |
Lele37g0017 | 510 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 339 | 499 | IPR001650 | - | |
Lele37g0017 | 510 | SMART | ultradead3 | 147 | 343 | IPR014001 | - | |
Lele37g0017 | 510 | Pfam | Helicase conserved C-terminal domain | 354 | 460 | IPR001650 | - | |
Lele37g0017 | 510 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 275 | 283 | IPR000629 | - | |
Lele37g0017 | 510 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 159 | 329 | IPR014001 | - | |
Lele37g0017 | 510 | CDD | SF2_C_DEAD | 340 | 469 | - | - | |
Lele37g0017 | 510 | MobiDBLite | consensus disorder prediction | 46 | 72 | - | - | |
Lele37g0017 | 510 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 198 | 478 | IPR027417 | - | |
Lele37g0017 | 510 | Gene3D | - | 114 | 332 | IPR027417 | - | |
Lele37g0017 | 510 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 128 | 156 | IPR014014 | GO:0003724 | |
Lele37g0017 | 510 | FunFam | ATP-dependent RNA helicase DDX6 | 109 | 332 | - | - | |
Lele37g0017 | 510 | Pfam | DEAD/DEAH box helicase | 153 | 317 | IPR011545 | GO:0003676|GO:0005524 | |
Lele37g0017 | 510 | SMART | helicmild6 | 379 | 460 | IPR001650 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele37g0017 | Lele-ChrLele37 | 165521 | 170918 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele37g0017 | 128 | 473 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 39.080 | 2.12e-91 | 283 |