Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0014 ATGATTTCCGGTGATTGCCGACAGATGAGCAGCTACTCCTGGATGGATGGCGTCCTCTACTGCAAGCCCCATTTTGAGCAGCTTTTCAAGGAATCTGGAAATTTCAGCAAGAACTTTCAGTCAGCGAGGTCCTCTGAGAAGAATGATCTGTCAAGGACTTCAAGCAAGCTGTCCTCCATGTTCAGTGGAACCCAGGACAAGTGCTCTGTGTGTGCCAAGACAGTCTATCCTCTGGAGAAGGTGACGCTGGAAGGAGAGTGCTTCCACAAGTCGTGCTTCAGGTGCGCTCATGCAGGCTGCCCTCTCACCCACTCCTCCTACGCCGCCCTCGACGGCGTGCTCTACTGCAGGCACCACTTTGCCCAGCTCTTCATGGAGAAGGGAAATTACAACCATGTCCTCCAGGCTGCTGCCCACAAGCGCAGTGCAAGCGCTGGAAATGCTCAAGGTAAAATGATACTTTTATTACATACTGAGTTTTTTATTATTTGTTATTTTGGGATAAACAAGCATGCTGGAAATAGCATCAGCTTTGTACTCGAGAAAATGATTTATTGCAACATTAGGAACATTGCTGAGAAACTAGTGAAATTAGGAAATGCTCAAGCTCAATGA 615 0.4764 MISGDCRQMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFQSARSSEKNDLSRTSSKLSSMFSGTQDKCSVCAKTVYPLEKVTLEGECFHKSCFRCAHAGCPLTHSSYAALDGVLYCRHHFAQLFMEKGNYNHVLQAAAHKRSASAGNAQGKMILLLHTEFFIICYFGINKHAGNSISFVLEKMIYCNIRNIAEKLVKLGNAQAQ 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0014 204 FunFam LIM domain and actin-binding 1 62 132 - -
Lele37g0014 204 Gene3D Cysteine Rich Protein 62 132 - -
Lele37g0014 204 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 8 39 - -
Lele37g0014 204 PANTHER OS06G0237300 PROTEIN 9 47 IPR045268 -
Lele37g0014 204 Pfam LIM domain 68 123 IPR001781 -
Lele37g0014 204 CDD LIM2_SF3 68 128 - -
Lele37g0014 204 ProSiteProfiles LIM domain profile. 66 126 IPR001781 -
Lele37g0014 204 SMART lim_4 67 119 IPR001781 -
Lele37g0014 204 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 94 134 - -
Lele37g0014 204 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 60 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0014 Lele-ChrLele37 149761 154033 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele37g0014 LIM 1.4e-10 CL0167