Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0003 ATGAACATGATGAGACAACTCAAAAGCATTGCTTCAGGGCGCACTTCCATTTCATCGGATTCTGGAGGGCAGTTTACCACAAAGAGAGTTAAGGTTAATCAAGAAACTGAGGAAACACATTCTATTGGGAGAGGCAGGGCAGATCGGAAGCATAATGGGGATGCATCAAAAGAAGCTACGGTAGATGCACCCAGTGCATCTGTTGTAACCAAAACAGAGAGATCAGGTTATCATCAGCTTCCTAAGGAGTTGCATGAAATGAAAATTAGAGATGTGAAAGGCAACAATTCCGATGAAAAGGATATAGAGGCAACTATAGTCAGCGGTAATGGAACAGAAGTAGGTCAGATGATTACTACTACCATTGGTGGTAAAGGCGGACAACCAAAGCAGACACTCTCATACATGGCAGAACGTGTGGTTGGCACTGGTTCCTTTGGTGTTGTTTTTAAGGCCCAGTGTGTTGAGACTGGTGAAGCGGTTGCCATTAAGAAGGCGTTGCAAGACAAAAGATATAAAAATAGGGAACTCCAGATAATTCGCAAGCTTGACCACCTTAACGTTTGTCAATTGAAGAACTATTTCTTTTCAACTACTGATAAAGATGAGTTGTTCCTGAACCTAGTTTTGGAGTATGTACCTGAAACTGTCTATAGAGTCTTAAAGCAATATACTAGGATACACCAGCGCATGCCTATCATTTATGTACAACTGTATACATATCAAATGTGTCGTGCACTAAATTATTTGCATAATGTGGTTGGTGTGTGTCATCGTGACATCAAACCCCAGAACTTACTGGTTAATTCCGAGACTCATCAGCTAAAGATGTGTGATTTTGGGAGTGCAAAGATGTTGGTGCCTGGTGAAGCTAACATATCATACATATGCTCAAGGTACTACAGGGCTCCAGAACTTATATTTGGGGCAACAGAATACACAACTGCTATTGACATATGGTCTGTTGGTTGTGTTATGGCTGAGCTCCTTCTAGGAAAGCCACTGTTTCCGGGAGAAAGTGGGGTTGATCAATTGGTTGAAATCATTAAGATCTTGGGTACACCCACAAGAGAAGAAATAAAGTGCATGAATCCAAATTATGAAGAATTTAAGTTCCCTCAGATAAAAGCACACCCATGGCACAAGGTTTTTCAGAAGAGAATGCCCGAAGAAGCGGTGGATCTCGTCTCAAGACTGCTTCATTATTCACCAAATCTACGTTGCACTGCTTTGGAAGCATGTGCGCACTCCTTCTTTGATGATCTCAGAGACCCAAATACGCGTTTACCAAATGGGCAACCACTACCTCCATTGCTCAAGTTCACTACTAAAGAACTGGCTGGTGCCCCTGCTGAGTTATGTAATCGTCTTATTCTTAAGCACGCCAAGGACTGA 1395 0.4222 MNMMRQLKSIASGRTSISSDSGGQFTTKRVKVNQETEETHSIGRGRADRKHNGDASKEATVDAPSASVVTKTERSGYHQLPKELHEMKIRDVKGNNSDEKDIEATIVSGNGTEVGQMITTTIGGKGGQPKQTLSYMAERVVGTGSFGVVFKAQCVETGEAVAIKKALQDKRYKNRELQIIRKLDHLNVCQLKNYFFSTTDKDELFLNLVLEYVPETVYRVLKQYTRIHQRMPIIYVQLYTYQMCRALNYLHNVVGVCHRDIKPQNLLVNSETHQLKMCDFGSAKMLVPGEANISYICSRYYRAPELIFGATEYTTAIDIWSVGCVMAELLLGKPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYEEFKFPQIKAHPWHKVFQKRMPEEAVDLVSRLLHYSPNLRCTALEACAHSFFDDLRDPNTRLPNGQPLPPLLKFTTKELAGAPAELCNRLILKHAKD 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0003 464 Pfam Protein kinase domain 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0003 464 Gene3D Transferase(Phosphotransferase) domain 1 215 463 - -
Lele37g0003 464 MobiDBLite consensus disorder prediction 1 30 - -
Lele37g0003 464 Gene3D Phosphorylase Kinase; domain 1 120 214 - -
Lele37g0003 464 MobiDBLite consensus disorder prediction 31 57 - -
Lele37g0003 464 SMART serkin_6 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0003 464 FunFam Glycogen synthase kinase-3 beta 119 214 - -
Lele37g0003 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Lele37g0003 464 FunFam Shaggy-related protein kinase kappa 215 463 - -
Lele37g0003 464 SUPERFAMILY Protein kinase-like (PK-like) 134 443 IPR011009 -
Lele37g0003 464 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 101 463 - -
Lele37g0003 464 ProSitePatterns Protein kinases ATP-binding region signature. 141 165 IPR017441 GO:0005524
Lele37g0003 464 CDD STKc_GSK3 130 422 IPR039192 -
Lele37g0003 464 ProSiteProfiles Protein kinase domain profile. 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele37g0003 464 MobiDBLite consensus disorder prediction 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0003 Lele-ChrLele37 63546 69594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0003 141 426 MAP Kinase Gene Family AT3G45640 34.915 1.36e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Lele37g0003 Pkinase 2.2e-62 CL0016