Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1387 ATGGAGAGTATCATCCCTCTTCTCACTACTCTCTCACATCCAGTCATCCTTTCTTCTCACACATTAAAGGCTGAGGAGGAGGTGCGACAGAGCCATGGATGAAGGACTTATCTGTTTGAATCGACAATTCTTGGTCCTGGATTGGGCCCTCTGCTCCTCTTCACTGGGGATATTTCCTTTTCTTCCTTGGTTTTCAGAATCGTTGACCGGGGACAAAATTCAGCAACCGGAGTCTCCAGTAGTGTGGATTTTCCCATAAAAGTCTATGACTCTGTTTCATGTTTTATTTCTGTGCAAGATCCACTACCATGCAGAGCCAGCTTGTGTGTAGTGGATGTAGGAGCATTTTACTTTACCCTAGAGGGGCGACCAATGTTTGTTGTGCATTATGCAACACAGTTACCTCGGTTCCTCCACCTGGTAAGCTCCTTTTCCTTTGTTATTATTTCAAAGAAGTATTTACGTGCTACATACTTAGGAGTGGAAATGTCTCAGCTTTATTGTGGAGGTTGTCGGACATTGCTAATGTACACACGTGGAGCTCCAAGTGTGAGATGTTCTTGTTGTCAAACCATAAACCTTGCACCAGGGAAGGATGGTGGTGTCATGTGGATACTGTTTAAGATGAGCAATGGAAGGATTCCAATTCCTGTCCACAGACCTAATGGAACAACCAACTCTGGAACATTGTCTTCTACTCCAACGTGCCAAACTGTCCTGGTTGAAAATCCTATGTCTGTTGATGCAAGTGGGAAACTGCAGATAAGAAATAATGTCGCCGCATTATTTTGCTATGTTTTGAAAGGTTCACAATTTGAGTCATTTTCATTGTGTGAAGCACAAGAAGATAGATATTCTGTGAGTACAGGTGTGAAAAGGGCATCAAATTTGTCATTCTATGGTTCTCAGGCTCACTTTGTTGCTGCCTTTTTTCCCAAGAAAATGGGCCATAAGATTTAA 960 0.4271 MESIIPLLTTLSHPVILSSHTLKAEEEVRQSHGXRTYLFESTILGPGLGPLLLFTGDISFSSLVFRIVDRGQNSATGVSSSVDFPIKVYDSVSCFISVQDPLPCRASLCVVDVGAFYFTLEGRPMFVVHYATQLPRFLHLVSSFSFVIISKKYLRATYLGVEMSQLYCGGCRTLLMYTRGAPSVRCSCCQTINLAPGKDGGVMWILFKMSNGRIPIPVHRPNGTTNSGTLSSTPTCQTVLVENPMSVDASGKLQIRNNVAALFCYVLKGSQFESFSLCEAQEDRYSVSTGVKRASNLSFYGSQAHFVAAFFPKKMGHKI 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1387 319 Coils Coil 316 319 - -
Lele36g1387 319 PANTHER PROTEIN LSD1 160 197 IPR040319 -
Lele36g1387 319 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 165 194 IPR005735 -
Lele36g1387 319 Pfam LSD1 zinc finger 168 192 IPR005735 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1387 Lele-ChrLele36 15815335 15823705 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Lele36g1387 zf-LSD1 5e-13 No_clan