Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele36g1381 | ATGGCAAAATTTTCGGTCGGAGGGGACGACGATGGTGAGGGACCCAGCAACCCGACTCAAAAGCGACGCAGGATTCCTGTTAGCCGCGGCACCGTCCGAGAAGACGAACGACAGGATATCGGAAACCCAAGCGGAATAGAAGACGAAAGAGAAGATATTGTGCAGGAACTAAAAGTGTTTCAAAGTGAAGAAGATCCATGGGACGATGATTCTGGCAATTGCTTTTTAGCCGGATCAAGCGATAGCGGTGAAGAGAACAATGTTTCAGCGCCTGAAAATAGGGATAGGTCCATTTCTGTCACCCTTAGCGACCCTGATGTGTTTGATTGCTGTATCTGCTATGAACCCTTGAGTATCCCTATCTTCCAGTGTGAGAATGGGCATATTGCTTGCTCTTCCTGTTGTGTTAAACTTGGGAACAAGTGTCCCATGTGCTCTATGCCCATTGGCTATAACCGTTGCCGAGCTATTGAGAAGGTGCTGGAATCTGTTAAGATATCCTGCGTAAATGCACAATATGGTTGTAGAGAAACTATAACTTACAGTAAGAAAAATGCCCATGAAAAGCAATGCATTTATGCACCTTATACATGCCCACAATCAGGTTGCAACTTTGTTGCCCCATCTAGGGAGTTGTCACTCCACTTTCGCCGTAAACATGGGCTTTCTACGAAGAATTTTACCTATAACAGCTTCTTCTCTATCTTCCTGAGGGTCAATGATGAAATTATTGTTCTTCAAGAACAGAATGGTGCCGATCTATTTATGCTCAAGAATAAAGTGCGGGATCTGGGGAATACAGTCAATGTTAGTTGCATTTGTCCCCATTTATTCCCAAAGGCTTGCCATTATGATATTTTGGTCAGATCTCAGGGTTGCTGTCTGAAAATACATTGTTTAGTGGAGAACAATCATGGTCGTAATGCCAATAATACTGCCCCACCAGGGTTTCTTTTGATCCCATCGTGGTTTTTTGGTTCTTCTGGACAGCTCAAATTGGACGTTCGCATTAAGTGTAATATTACTCATCTTGCAGATGTCTAA | 1044 | 0.4358 | MAKFSVGGDDDGEGPSNPTQKRRRIPVSRGTVREDERQDIGNPSGIEDEREDIVQELKVFQSEEDPWDDDSGNCFLAGSSDSGEENNVSAPENRDRSISVTLSDPDVFDCCICYEPLSIPIFQCENGHIACSSCCVKLGNKCPMCSMPIGYNRCRAIEKVLESVKISCVNAQYGCRETITYSKKNAHEKQCIYAPYTCPQSGCNFVAPSRELSLHFRRKHGLSTKNFTYNSFFSIFLRVNDEIIVLQEQNGADLFMLKNKVRDLGNTVNVSCICPHLFPKACHYDILVRSQGCCLKIHCLVENNHGRNANNTAPPGFLLIPSWFFGSSGQLKLDVRIKCNITHLADV | 347 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele36g1381 | 347 | CDD | RING-HC_SIAHs | 108 | 146 | - | - | |
Lele36g1381 | 347 | ProSiteProfiles | Zinc finger RING-type profile. | 110 | 146 | IPR001841 | - | |
Lele36g1381 | 347 | Pfam | Seven in absentia protein family | 153 | 229 | IPR018121 | GO:0005737|GO:0006511|GO:0007275 | |
Lele36g1381 | 347 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 158 | 216 | IPR013083 | - | |
Lele36g1381 | 347 | ProSiteProfiles | Zinc finger SIAH-type profile. | 163 | 221 | IPR013010 | GO:0008270 | |
Lele36g1381 | 347 | MobiDBLite | consensus disorder prediction | 27 | 65 | - | - | |
Lele36g1381 | 347 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 | 79 | 338 | IPR044286 | - | |
Lele36g1381 | 347 | MobiDBLite | consensus disorder prediction | 75 | 95 | - | - | |
Lele36g1381 | 347 | MobiDBLite | consensus disorder prediction | 1 | 95 | - | - | |
Lele36g1381 | 347 | SUPERFAMILY | TRAF domain-like | 163 | 337 | - | - | |
Lele36g1381 | 347 | SUPERFAMILY | RING/U-box | 109 | 152 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele36g1381 | Lele-ChrLele36 | 15788076 | 15790500 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele36g1381 | 106 | 220 | C3H Transcription Factor Family | AT2G41980 | 35.897 | 6.49e-20 | 87.0 |