Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1363 ATGAGTCGGTCTATGCTAATTCACACAAAAGAAGAAGGATACTTTACTAAAGATGAAAAAGATAATAAGGACGAGTATAACAACGAAAATGAGCATGGTGAAGATGCTGAGGTTGGCAATGATCTTCAAGATGAGGCAAAGTACTTGTTAGGAGACGAAGGTCCAAATTCTACAGGGGTATCGATCTGTCTTCCAGCAGAAGATGCGGATGAGGATAATGAGTCTGCTAGACATTTCAGCCATGGATCTTACCTGGTCCAAGGAAAACTAGACCATGGAATGGAGGATTATATTTTTACTGAACACAGGAACAGCAATGGCTATGACTTAGGACTGTATGCAATCTTTGATGGCCAAGGACTGTATGCAATCTTTGATGGCCACGCGGGTCGAGCTGTCGCAAGATACTTGCAAGGCCATCTATTTGACGGAATATTGAATGAGGTGATAACGAACGAAGAGGCTTGTGAGTGCGTGAAGGACATGGATGATGCAAAAAAAGCATCTAAGAAGTTGGTTAAAGAAGCATTAGTCCAAGGAAGCTATGATGATATTCCATGCATTGTTGTAATGTTCTAG 579 0.4145 MSRSMLIHTKEEGYFTKDEKDNKDEYNNENEHGEDAEVGNDLQDEAKYLLGDEGPNSTGVSICLPAEDADEDNESARHFSHGSYLVQGKLDHGMEDYIFTEHRNSNGYDLGLYAIFDGQGLYAIFDGHAGRAVARYLQGHLFDGILNEVITNEEACECVKDMDDAKKASKKLVKEALVQGSYDDIPCIVVMF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1363 192 SUPERFAMILY PP2C-like 75 147 IPR036457 -
Lele36g1363 192 ProSitePatterns PPM-type phosphatase domain signature. 121 129 IPR000222 GO:0043169
Lele36g1363 192 Gene3D - 62 145 IPR036457 -
Lele36g1363 192 Gene3D - 146 192 IPR036457 -
Lele36g1363 192 PANTHER PROTEIN PHOSPHATASE 43 146 - -
Lele36g1363 192 SUPERFAMILY PP2C-like 146 192 IPR036457 -
Lele36g1363 192 MobiDBLite consensus disorder prediction 1 50 - -
Lele36g1363 192 MobiDBLite consensus disorder prediction 10 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1363 Lele-ChrLele36 15656827 15658952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1363 77 148 PP2C-type Phosphatase Gene Family AT2G34740 50.000 1.29e-16 74.3