Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1356 ATGAAGCTCTTTAGGCTTTTGGTTTTATCCTTATCTTTCTTCTCTGTCTTGGGACAGCTTCCTTCTCAGGACATCTTAGCATTGTTGGAATTTAAGAAAGGCATCAAGCATGACCCTACTGGTTATGTCCTCAATTCCTGGAATGAAGAGTCCATTGACTTTAATGGATGCCCATCTTCATGGAATGGAGTTTTGTGTAATGGTGGCAATGTTGCTGGGGTTGTCTTAGATAACCTGGGACTCTCCGCTGAGGTTGACTTGAGTGTTTTTTCAAACCTCACAAAGCTTGTCAGGCTCTCGTTGTCCAACAATTCCATATCAGGAACACTCCCTGACAACATAGGAGACTTCAAAAGTCTTCAATTTCTAGATATCTCCAATAACCTTTTCTCTTCATCCATACCACAGGGAATTGGTAAGCTAGCTAGCTTACAGAACTTGTCATTGGCAGGGAATAATTTCTCTGGCCCAATTCCTGTCTCAAATGCAGGGATGCCATCGATCCAATCTTTGGACTTGAGCCGTAACTCCTTTTCTGGAGCGCTGCCAGCTTCTTTGACTAAGCTGAATAGCCTGGTATCTCTCAATTTGTCTCATAACAGCTTCACTGGAAAGATTCCCAAAGGTTTTGATCTGATATCTGCTCTTGAAAAGGTTGACTTGCATGGAAATATGCTTGATGGTCAACTGGATATTAAATTTATGCTTTTTACAGCTGCCAGTTATGTTGATTTTAGTGATAATATGTTAGTGAGTTCTAACTCCCCGCAGCAGAGGTTTCTACCCCGAATCTCTGAAAGTATCAAGTATTTGAATTTAAGCCACAACCAGCTGGTTGGATTGTTGGATGGTGAAGGCGAGCTGTCACTTTTTGAAGACCTGAAGGTGTTGGATCTTAGCTACAATCAATTGTCTGGAGAACTGCCTGAATTTGAATTTGTCTATGATCTCCAAGTCCTCAGGCTTAGCAACAACAGATTTTCAGGATTTCTTCCAAATAGCCTTCTCAAGGGAGATCCTTTGGTTATAACCGAACTTGATTTGAGTGCCAACAATCTCTCAGGGCCAATAGGATTAATCACATCAACAACATTGAGGTTTCTGAATCTCTCATCGAATGGTTTCACTGGTGAGCTGCCACTTCTAACAGGGAGCTGTGCTGTTCTTGATCTTTCAAATAACAGACTAGAAGGAAATCTATCCAGGATGGTGAAATGGGGAAATATAGAATTTCTTGATCTCAGTAGGAATCATTTCATAGGGCCCATTCCTGAGGAAACTCCTCAATTTTTACGATTGAATTATCTGAATTTCTCCCGTAATTCTCTTAGCAGCTCCCTCCCTAGTGTCTTAGTACAGTATCCTAAGCTAAGAGTGCTTGATGTTAGTTCCAACCAGTTAGATGGACAGCTTCCCAATAAGCTGCTTGATATGCCAACTTTGCAAGAGCTTCACCTTGAAAATAATTTCATTTCAGGAAGCATTAATTTATCATCTTCCCCCGGTCAATCTGATCTTCAGATTCTCGATCTTTCTCACAACCAATTTGATGGGTACTTTCCTGAAAACTTCGGATCATTAACTGGCCTGAAAGTGCTCAATATTGCTGGAAATAATTTTTCTGGTTCTCTTCCAAGTGCCATTGAATTGAGTTCATTAGATTCGTTGGATATATCGGAGAATCATTTTACAGGTCCTTTACCAACTGACCTGCCAAAGGGACTAAAAAACTTTAATGCTTCATACAATGATCTGTCTGGTATTGTCCCAGAAAATCTTAGGAAGTTTCCTAGTCCTTCTTTCTTTCCTGGGAATGCCAAGTTGCGATACCCTAATGGTCCTCCTGGATCAACCATTGTGCCTGCTGAAGGTTCAAAGAAGCAGCCTATGGGCACTATCATTAAAGTAATAATTATAGTATCATGTGTGGTTACACTGTTCATTATAATCCTGCTTGCAATCTTCATACATTACATTTGCATATCAAGATCTCCACCAGAATATGCTGCTAGTAAGGACATACAGGGGCTTGCTCAACCGAACTTACCTGCCATAGGCCGCACAACAGACAGGGGTGGGGCTTTGGTTGTATCAGCCGAGGATCTTGTGACCTCAAGGAAAGGATCATCTTCAGAGATAATCGGCCCAGATGAAAAATTGCCAGCCATGACTATGTCCCCATCAAAAAACAGCCACTTTTCCTGGTCACCAGGGTCTGGTGATTCCTTCACAGCTGAAAATTTTGCAAGACTTGATGTGAGATCACCTGATAAGTTAATTGGCGAGCTGCATTTTCTTGATGATGCAATAGCGTTGACCCCCGAGGATCTTTCAAGGGCCCCTGCTGAAGTTTTGGGGAGAAGCAGTCATGGAACTTCTTATAAGGCTACTCTGGAGAATGGCTTGTTACTGAGGGTGAAGTGGTTGAGAGAAGGAGTGGCTAAACAGAGAAAAGAATTTGCCAAAGAGGCTAAAAAGTTTGCAAACATCAGGCATCCGAATGTTGTGGGATTGAGAGGATATTATTGGGGTCCTACACAGCATGAGAAGCTTATTCTTTCAGACTTCATTTCTCCTGGAAGTCTTGCAACTTTTCTTTATGATCGACCAGGAAGAAAAGGTCCACCACTAACCTGGGCTCAGAGGCTCAAGATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCACTTTGATCGTGCTATTCCTCATGGGAACCTAAAAGCAACAAATGTGCTGTTAGATACACCCGATTTGAATGCAAGAGTAGCCGATTATTGCCTTCACCGGCTAATGACTCAGGCTGGTACTACTGAACAGATTCTTGATGCCGGGGTTTTGGGATATCGAGCACCAGAGTTAGCTGCTTCCAAGAAGCCAACCCCCTCCTTTAAATCAGATGTCTATGCTTTTGGAGTGATACTCTTGGAACTTTTAACTGGAAGGTGTGCCGGTGATGTCATATCGGGTGAGGATGGAGGTGTTGATATGACTGATTGGGTAAGGTTGCGTGTTGCTGAAGGTAGAGGATCAGAATGTTTCGATGCCGCGTTGATGCCAGAAGTGGGAAATCCAACTGTAGAAAAGGGAATGAAGGATTTCCTAGGAATAGCTCTACGATGCATTCGGTCTGTTTCGGAGAGGCCAGGTATCAAGACTATATATGAAGACGTTTCATCCATATAA 3186 0.425 MKLFRLLVLSLSFFSVLGQLPSQDILALLEFKKGIKHDPTGYVLNSWNEESIDFNGCPSSWNGVLCNGGNVAGVVLDNLGLSAEVDLSVFSNLTKLVRLSLSNNSISGTLPDNIGDFKSLQFLDISNNLFSSSIPQGIGKLASLQNLSLAGNNFSGPIPVSNAGMPSIQSLDLSRNSFSGALPASLTKLNSLVSLNLSHNSFTGKIPKGFDLISALEKVDLHGNMLDGQLDIKFMLFTAASYVDFSDNMLVSSNSPQQRFLPRISESIKYLNLSHNQLVGLLDGEGELSLFEDLKVLDLSYNQLSGELPEFEFVYDLQVLRLSNNRFSGFLPNSLLKGDPLVITELDLSANNLSGPIGLITSTTLRFLNLSSNGFTGELPLLTGSCAVLDLSNNRLEGNLSRMVKWGNIEFLDLSRNHFIGPIPEETPQFLRLNYLNFSRNSLSSSLPSVLVQYPKLRVLDVSSNQLDGQLPNKLLDMPTLQELHLENNFISGSINLSSSPGQSDLQILDLSHNQFDGYFPENFGSLTGLKVLNIAGNNFSGSLPSAIELSSLDSLDISENHFTGPLPTDLPKGLKNFNASYNDLSGIVPENLRKFPSPSFFPGNAKLRYPNGPPGSTIVPAEGSKKQPMGTIIKVIIIVSCVVTLFIIILLAIFIHYICISRSPPEYAASKDIQGLAQPNLPAIGRTTDRGGALVVSAEDLVTSRKGSSSEIIGPDEKLPAMTMSPSKNSHFSWSPGSGDSFTAENFARLDVRSPDKLIGELHFLDDAIALTPEDLSRAPAEVLGRSSHGTSYKATLENGLLLRVKWLREGVAKQRKEFAKEAKKFANIRHPNVVGLRGYYWGPTQHEKLILSDFISPGSLATFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAIPHGNLKATNVLLDTPDLNARVADYCLHRLMTQAGTTEQILDAGVLGYRAPELAASKKPTPSFKSDVYAFGVILLELLTGRCAGDVISGEDGGVDMTDWVRLRVAEGRGSECFDAALMPEVGNPTVEKGMKDFLGIALRCIRSVSERPGIKTIYEDVSSI 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1356 1061 SMART LRR_typ_2 165 188 IPR003591 -
Lele36g1356 1061 SMART LRR_typ_2 550 574 IPR003591 -
Lele36g1356 1061 SMART LRR_typ_2 189 212 IPR003591 -
Lele36g1356 1061 SMART LRR_typ_2 117 141 IPR003591 -
Lele36g1356 1061 SMART LRR_typ_2 314 338 IPR003591 -
Lele36g1356 1061 SMART LRR_typ_2 93 116 IPR003591 -
Lele36g1356 1061 SMART LRR_typ_2 454 478 IPR003591 -
Lele36g1356 1061 SUPERFAMILY RNI-like 289 595 - -
Lele36g1356 1061 Gene3D Ribonuclease Inhibitor 139 233 IPR032675 -
Lele36g1356 1061 Pfam Leucine rich repeat 166 226 IPR001611 GO:0005515
Lele36g1356 1061 Pfam Leucine rich repeat 506 563 IPR001611 GO:0005515
Lele36g1356 1061 Pfam Leucine rich repeat 412 467 IPR001611 GO:0005515
Lele36g1356 1061 SUPERFAMILY L domain-like 44 379 - -
Lele36g1356 1061 FunFam LRR receptor-like serine/threonine-protein kinase GHR1 20 265 - -
Lele36g1356 1061 ProSiteProfiles Protein kinase domain profile. 779 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele36g1356 1061 FunFam Leucine-rich repeat receptor-like protein kinase 764 856 - -
Lele36g1356 1061 Pfam Protein tyrosine and serine/threonine kinase 783 980 IPR001245 GO:0004672|GO:0006468
Lele36g1356 1061 Gene3D Phosphorylase Kinase; domain 1 773 856 - -
Lele36g1356 1061 MobiDBLite consensus disorder prediction 708 727 - -
Lele36g1356 1061 FunFam Pollen receptor-like kinase 1 857 1061 - -
Lele36g1356 1061 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 382 612 - -
Lele36g1356 1061 PANTHER OS07G0626500 PROTEIN 7 1061 - -
Lele36g1356 1061 Pfam Leucine Rich repeat 362 378 IPR001611 GO:0005515
Lele36g1356 1061 Gene3D Ribonuclease Inhibitor 234 617 IPR032675 -
Lele36g1356 1061 SUPERFAMILY Protein kinase-like (PK-like) 782 1056 IPR011009 -
Lele36g1356 1061 ProSiteProfiles Leucine-rich repeat profile. 293 315 IPR001611 GO:0005515
Lele36g1356 1061 Pfam Leucine Rich Repeat 317 336 IPR001611 GO:0005515
Lele36g1356 1061 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Lele36g1356 1061 Gene3D Ribonuclease Inhibitor 23 138 IPR032675 -
Lele36g1356 1061 Gene3D Transferase(Phosphotransferase) domain 1 858 1061 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1356 Lele-ChrLele36 15607505 15611450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1356 408 601 Receptor kinase-like Gene Family AT5G07280 32.287 5.86e-15 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele36g1356 PK_Tyr_Ser-Thr 2.8e-28 CL0016