Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1352 ATGAATAACCGTGGGGGAGTTGGGAGGGCTGCCTCGGGGAAAAGAAGACTGAAAGACCTATTGCTTCAAAAAGACAATCGTTTTTGTGCTGATTGTAATGCTCCAGATCCCAAGTGGGCGTCAGCTAATATTGGAGTTTTTATCTGCTTAAAATGTTGCGGTGTACACAGAAGCCTTGGTACTCATATATCAAAGGTTCTGTCCGTGACATTGGACGAATGGTCGGATGATGAAATAGATGCAATGATTGAAGTTGGAGGAAATTCTTCTGCTAATAAAATTTATGAGGCTCATATTCCAGAAGGATACAGTAAGCCCGCACCAGATGCCAGTCATGAACAGCGTGCAAATTTCATCCGATCTAAGTATGAGCTTCAAGACTTTTTGAAACCTGGTTTGCGCATTGCATCTGGGAAAAGCGCTCAAGAGTCAAATTCTTCCAAAAAACTTACGGATAGTTCCCGAACCACTAGTGGTCCCCAGAAAACGGAAGGAATGGTTGAATTTATCGGGTTGCTGAAGGTGACAGTGGTTAAAGGCGCAAATTTAGCTATTCGAGATATGATGTCTAGTGATCCATATGTCATCTTAAATCTTGGCCAACAGATTTCATTATGCTACCTTTCTGAAAATGACTTCGGTGATATTTGCCTCCAGACCGTTCAGTCAAGTGTAGTGAACAGTAACTTGAATCCAGTCTGGAATGAGGAACTTATGCTATCTGTTCCCCAGGAATATGGAACATTGAAATTGCAAGTATATGATCATGATACATTCTCGGCGGATGATATAATGGGAGAGGCAGAAATTGATCTCCAACCCATGATAACGTCAGCAATGGCATTTGGAAATGCAGAAATGTTCGGCAATATGCAGATTGGGAAATGGCTTAAATCTGATGACAATGCTCTCATGGAGGATAGCTTAGTCAATATAGTTGATGGAAAGATTTTACAAAAAATGACTCTCAAGCTCCAGAATGTTGAATCTGGAGAAATAGATCTGGAACTTGAATGGTTGCCTCTTGATCAATAG 1035 0.4106 MNNRGGVGRAASGKRRLKDLLLQKDNRFCADCNAPDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDEWSDDEIDAMIEVGGNSSANKIYEAHIPEGYSKPAPDASHEQRANFIRSKYELQDFLKPGLRIASGKSAQESNSSKKLTDSSRTTSGPQKTEGMVEFIGLLKVTVVKGANLAIRDMMSSDPYVILNLGQQISLCYLSENDFGDICLQTVQSSVVNSNLNPVWNEELMLSVPQEYGTLKLQVYDHDTFSADDIMGEAEIDLQPMITSAMAFGNAEMFGNMQIGKWLKSDDNALMEDSLVNIVDGKILQKMTLKLQNVESGEIDLELEWLPLDQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1352 344 Pfam Putative GTPase activating protein for Arf 15 130 IPR001164 GO:0005096
Lele36g1352 344 ProSiteProfiles C2 domain profile. 154 285 IPR000008 -
Lele36g1352 344 PRINTS HIV Rev interacting protein signature 45 62 IPR001164 GO:0005096
Lele36g1352 344 PRINTS HIV Rev interacting protein signature 66 87 IPR001164 GO:0005096
Lele36g1352 344 PRINTS HIV Rev interacting protein signature 26 45 IPR001164 GO:0005096
Lele36g1352 344 Gene3D C2 domain 169 344 IPR035892 -
Lele36g1352 344 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 167 273 IPR035892 -
Lele36g1352 344 ProSiteProfiles ARF GTPase-activating proteins domain profile. 14 128 IPR001164 GO:0005096
Lele36g1352 344 CDD ArfGap 17 123 - -
Lele36g1352 344 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 9 344 IPR044518 GO:0005096|GO:0005543
Lele36g1352 344 FunFam Arf-GAP with dual PH domain-containing protein 1 9 137 - -
Lele36g1352 344 Gene3D Arf GTPase activating protein 6 133 IPR038508 -
Lele36g1352 344 SMART arf_gap_3 14 136 IPR001164 GO:0005096
Lele36g1352 344 Pfam C2 domain 172 278 IPR000008 -
Lele36g1352 344 MobiDBLite consensus disorder prediction 138 162 - -
Lele36g1352 344 CDD C2_ArfGAP 170 331 - -
Lele36g1352 344 FunFam ADP-ribosylation factor GTPase-activating protein AGD12 169 344 - -
Lele36g1352 344 SUPERFAMILY ArfGap/RecO-like zinc finger 14 130 IPR037278 -
Lele36g1352 344 SMART C2_3c 172 284 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1352 Lele-ChrLele36 15581387 15585567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1352 5 344 C2H2 Transcription Factor Family AT4G21160 70.201 0.0 505