Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1347 ATGGCACTTTCTATGCACAAAGATTCACCCAGCAAGCATCAGATGGACTCCAGCAAGTACGTGAGGTATACGCCTGAGCAGGTTGAGGCTTTGGAGAGGGTTTATGCAGAATGCCCAAAACCTAGTTCTCTGAGAAGACAACAGCTCATTAGAGAGTGTCCTATACTTTCTAATATTGAGCCCAAACAGATCAAAGTTTGGTTTCAGAACCGCAGATGTCGTGAAAAGCAGAGGAAGGAATCTTCACGGCTGCAGACAGTAAACAGGAAGCTTACTGCGATGAACAAGTTGTTAATGGAAGAGAATGATCGACTGCAGAAGCAGGTGTCACATTTGGTCTACGAAAATGGATACATGAAACAACAGATACATACTGCTTCTGCTACTACTACAGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAAAAACAGCAGCAAAACCCAACACCTCAGCATCCTCAGAGGGATGCCAATAACCCAGCGGGTCTTCTGGCAATAGCAGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCGACTGGGTGCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTAGCTGTTTCCCGCAATTGTAGTGGAGTAGCAGCACGAGCTTGTGGCCTCGTGAGTCTAGAGCCCACGAAGGTCGCCGAGATTCTTAAAGATCGTACATCTTGGTATCATGATTGCCGCTGCCTTGATGTGTTGAGCATAGTCCCCACTGGAAATGGGGGGACGATTGAACTCCTGTACATGCAGACTTATGCACCTACGACATTGGCAGCAGCACGTGACTTTTGGACTCTTAGATACACTACCAATATGGAAGATGGAAGTCTTGTGATTTGTGAGAGGTCATTCACTTCGTCAACTGGTGGCCCCACAGGTCCTCCTGCATCAAACTTTGTTAGAGCTGAAATGCTTCCTAGTGGTTTTCTAATTAGACCCTGCGAGGGTGGTGGATCCATTATTCACATTGTTGATCATGTGGATTTAGATCCTTGGAGTGTTCCCGAAGTGCTCAGGCCCCTTTATGAATCATCAAAAATCCTGGCTCAGAAAATGACTATTGCAGCCTTGCGACATATAAGGCAAATTGCTCAAGAAACAAGTGGAGAAATTCAATATGGTGGGGGCCGCCAGCCTGCTGTTTTAAGAACATTTAGCCAGAGACTTAGCAGGGGCTTCAATGATGCTGTCAATGGCTTTGTGGATGATGGCTGGTCACTAATGGGTAGTGATGGTGCTGAGGATGTGACCATAGCCATTAACTCGTCTCCGAATAAATTTTTCGGGTCCCAATATGGTACCTCAATGTTCCCTGCATTTGGAGGTGGGGTGTTATGTGCCAAGGCATCAATGCTGCTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGCTTTCTGAGGGAACATCGCTCGGAGTGGGCTGATTATGGGGTTGATGCATACTCTGCTGCCTGTCTCAAGGCTAGTCCTTACACAATTCCTTGTGCAAGGCCCGGTGGCTTTCCTAGCAGTCAAGTCATTTTACCACTTGCTCATACTATTGAACATGAGGAGTTCTTGGAAGTAGTTCGTATAGAGGGTCATGCATTTTCCCCTGAAGATGTCGCTCTTGCCCGGGATATGTATCTTCTGCAGCTATGCAATGGAATTGATGAGAATGCAATCGGATCATGCGCTCAACTGGTTTTTGCACCTATTGATGAATCATTTGCTGATGATGCTGTCTTGCTTCCTTCTGGTTTCCGCGTTATACCATTGGATCCTAAAACAAATGGTTCAGCTGCAAATAGAACTTTGGATCTGGCTTCTACACTTGAAGCTGGATCAGGCAATGCCCGAGCACCTGGTGACACTGATCCTAACAGTTACAATCTTAGGTCGGTCCTTACTATTGCGTTCCAATTTATGTTTGAGAACCATATGCGGGACAATGTGGCAGCTATGGCTCGCCAGTATGTGCGTAGTGTTGTTGGGTCTGTTCAGAGAGTTGCCATGGCTATTGCTCCCTCTCAGCCAAGTACCCAACTCGGGCCGAAGTCTCTTCCTGGATCTCCCGAGGCTCTTACTTTAGCACGATGGATCTGCAGAAGCTACAGGATTCATACTGGTGGCGAGATTTTCCATGTTGAGTCCACAGCCACTGATGCGATCTTGAAGCAACTTTGGCACCATTCAGACGCAATCATGTGCTGCTCTGTAAAAGCAAATGCATCCCCGGTTTTCACCTTTGCAAACCAGGCTGGACTTGACATGCTTGAAACCACTCTTGTGGCCCTTCAAGATATAATGCTAGATAAAGTTCTCGATGAAGCTGGCCGCAAGATTCTCTGCTCCGAGTTTGCCAAGATTATGCAGCAGGGGTTTGCTTATATGCCAGCAGGAATATGCGTATCGAGCATGAACAGGCCAGTGTCGTATGAGCAGGCCATTGCTTGGAAAGTTCTGAACGATGATGATTCCAATCACTGCCTTACCTTCATGTTCATGAACTGGACTTTTGTCTGA 2541 0.4699 MALSMHKDSPSKHQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHTASATTTDNSCESVVMSGQKQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRTSWYHDCRCLDVLSIVPTGNGGTIELLYMQTYAPTTLAAARDFWTLRYTTNMEDGSLVICERSFTSSTGGPTGPPASNFVRAEMLPSGFLIRPCEGGGSIIHIVDHVDLDPWSVPEVLRPLYESSKILAQKMTIAALRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLSRGFNDAVNGFVDDGWSLMGSDGAEDVTIAINSSPNKFFGSQYGTSMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKASPYTIPCARPGGFPSSQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCNGIDENAIGSCAQLVFAPIDESFADDAVLLPSGFRVIPLDPKTNGSAANRTLDLASTLEAGSGNARAPGDTDPNSYNLRSVLTIAFQFMFENHMRDNVAAMARQYVRSVVGSVQRVAMAIAPSQPSTQLGPKSLPGSPEALTLARWICRSYRIHTGGEIFHVESTATDAILKQLWHHSDAIMCCSVKANASPVFTFANQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFAKIMQQGFAYMPAGICVSSMNRPVSYEQAIAWKVLNDDDSNHCLTFMFMNWTFV 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1347 846 CDD bZIP 71 110 - -
Lele36g1347 846 Gene3D - 11 85 - -
Lele36g1347 846 SUPERFAMILY Bet v1-like 167 378 - -
Lele36g1347 846 CDD START_ArGLABRA2_like 161 377 - -
Lele36g1347 846 ProSiteProfiles START domain profile. 157 385 IPR002913 GO:0008289
Lele36g1347 846 MobiDBLite consensus disorder prediction 134 159 - -
Lele36g1347 846 SUPERFAMILY Homeodomain-like 18 80 IPR009057 -
Lele36g1347 846 FunFam homeobox-leucine zipper protein ATHB-15 202 383 - -
Lele36g1347 846 Pfam MEKHLA domain 701 845 IPR013978 -
Lele36g1347 846 Coils Coil 88 108 - -
Lele36g1347 846 MobiDBLite consensus disorder prediction 134 157 - -
Lele36g1347 846 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 15 846 IPR044830 GO:0003700
Lele36g1347 846 SMART HOX_1 16 82 IPR001356 GO:0003677
Lele36g1347 846 Pfam Homeodomain 19 77 IPR001356 GO:0003677
Lele36g1347 846 CDD homeodomain 19 79 IPR001356 GO:0003677
Lele36g1347 846 SUPERFAMILY Bet v1-like 414 601 - -
Lele36g1347 846 Gene3D - 185 380 IPR023393 -
Lele36g1347 846 ProSiteProfiles 'Homeobox' domain profile. 14 78 IPR001356 GO:0003677
Lele36g1347 846 SMART START_1 166 376 IPR002913 GO:0008289
Lele36g1347 846 FunFam Homeobox-leucine zipper protein REVOLUTA 19 74 - -
Lele36g1347 846 Pfam START domain 167 374 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1347 Lele-ChrLele36 15537669 15543652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1347 5 846 Homeobox Transcription Factor Family AT2G34710 79.551 0.0 1409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele36g1347 START 4.7e-51 CL0209