Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1335 ATGAAAGAGGGAGGAAGAAAGCAGGGTGCGGCGTCACCGTGTGCGGCATGCAAGCTTCTTCGAAGAAGATGTGCTAATGACTGTGTCTTCGCTCCTTATTTCCCCGCCGACGAGCCTCACAAGTTCGCTAATGTTCACAAAGTCTTTGGAGCCAGTAATGTCAACAAGATGCTTCAGGAGCTACCAGTGCATCAAAGAGGGGATGCAGTGAGCAGTATGGTGTATGAGGCAAATGCTAGAGTGAGGGATCCTGTGTATGGGTGTGTTGGGGCCATCTCTTCTCTTCAGCAACAGATTGATTTGCTTCAGACCCAATTGGCCTTAGCCCAGGCGGAGGTGGTTCATCTTAGGGTTAGCCAGTCTGCTTCTCTTTCCAACCATGGGCTCAGCCCAACTAGTAGTGACTCGCCGCCACATTCAAATCCGATTTTTGACGTGGACTTTGTGATGGACCAATCCACTTATTCTGATTCAATGTGGCCCTGCTAGCGATATTTTTTAAAATTTCTTAAGCAATATAATGAGGTAAAATGTTATGGGGCCTCCCTTTCTTTTAAGGCAATAAACCATGATTTAAGATCAGCTTCTGAGCTTCACTCTAGTTCGCAGGCATTCCAAGTAGAATATACTAATCAAGCATAG 642 0.4626 MKEGGRKQGAASPCAACKLLRRRCANDCVFAPYFPADEPHKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLALAQAEVVHLRVSQSASLSNHGLSPTSSDSPPHSNPIFDVDFVMDQSTYSDSMWPCXRYFLKFLKQYNEVKCYGASLSFKAINHDLRSASELHSSSQAFQVEYTNQA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1335 213 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Lele36g1335 213 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Lele36g1335 213 Coils Coil 92 112 - -
Lele36g1335 213 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1335 Lele-ChrLele36 15465526 15468692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1335 1 162 AS2 family AT1G31320 72.093 3.21e-78 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele36g1335 LOB 2e-43 No_clan