Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1268 ATGTATGAGCATACATCATCCTTTGATCCCAACACAATGGCAGATGGCACTGTTTCCCTAAAAGACGGCCTTCCCGATTCCCCGGTCATGGCTGCCGGCAACCTCACAAGCAGTAACAATGGCTTGGACGAAAATCTCAAGCTCACAGTGGAGGAGCTCTCCTATCACCAGCACCAGAATCATCCACCGCCGCTGCACCCAGAAGACGTCTCGGCATTTGCTAACGGCGTCGCCGCCGCATCATTGAACCTCTCGCACCCTCAACATTTTGTTCTGAACGTAGAAAACTCGTACAACAATGAGAATTTGGTTCACCAAGTCATTGATGTCCTCAATTACGATCAATCAACTTGGGACCCTAAAGTTCAAGAGTTGCAGGGCGTGGGTTGTTCAAATCACCACCATGAACAACAGCAACCCCAACAATTTCATCAAATTGAGACCCAAAGCTACAATTCTTCTTCCATTCTCGACCCTCCTCCTTACCCTTCTTCTAATCTCCTTGACCTCCTCCATTACAACCCAGCCCAGAAGATACCCATGGGATTTCTCGGCGACATTCCGATAGGATCAGATAGCACAAGCGCGTGCTCTGTCTTGTATGATCCTCTGCTTCATTTGAATCTGCCTCCACAACCTCTGGCGCTAAGAGAGCTGTTTCAGTCTCTTCCTCGAGGCTATAGCTTGCCAACTAGTTCAAGAAATGGTTCTCTATTCGGTGGAGGGGATGAGATAGAGGGGAATGGGATTGTATATCAGGATAGAGATGGAAGCCAGCTTGACAATGGAGTTCTGGAATTTGACAGAGGAACTGCTCGTGTGGGCAAAGAAGGACAAGGAAAAGGCACCAAGCATTTTGCCACTGAGAAACAAAGAAGAGAGCAACTTAATGGCAAATACAATGTCTTGAGGAGTCTGATACCAAGCCCCACCAAGACGGATAGAGCATCTGTGGTTGGAGACGCCATTAACTATATTAAAGAGCTGATGAGAACAGTGAATGAGCTGAAATTGTTGGTGGAGAAGAAAAGATTTGGAATGGACAGGTGCAAGAGGCACAAACCTGAAGATGATGCTGGAGAGAGCTGTAACAGGAAACCCTATGGTGATCATCCAGAAGGATGCATAAGGACCTCATGGCTACAGAGGAAATCCAAAGACACCGAAGTTGATGTCCGGATCATCGACGATGAAGTCACAATCAAACTCGTTCAGAGGAAGAAGATCAGCTGCTTGCTGTTTGTCTCCAGAGTTCTGGATGAACTCCAGCTGGATCTTCACCATGTTGCAGGTGGACATGTTGGTGAATATTGCAGTTTCTTGTTCAACAGCAAGATATGGGGAATGATAGGTGCTGCCGCTTAG 1365 0.4718 MYEHTSSFDPNTMADGTVSLKDGLPDSPVMAAGNLTSSNNGLDENLKLTVEELSYHQHQNHPPPLHPEDVSAFANGVAAASLNLSHPQHFVLNVENSYNNENLVHQVIDVLNYDQSTWDPKVQELQGVGCSNHHHEQQQPQQFHQIETQSYNSSSILDPPPYPSSNLLDLLHYNPAQKIPMGFLGDIPIGSDSTSACSVLYDPLLHLNLPPQPLALRELFQSLPRGYSLPTSSRNGSLFGGGDEIEGNGIVYQDRDGSQLDNGVLEFDRGTARVGKEGQGKGTKHFATEKQRREQLNGKYNVLRSLIPSPTKTDRASVVGDAINYIKELMRTVNELKLLVEKKRFGMDRCKRHKPEDDAGESCNRKPYGDHPEGCIRTSWLQRKSKDTEVDVRIIDDEVTIKLVQRKKISCLLFVSRVLDELQLDLHHVAGGHVGEYCSFLFNSKIWGMIGAAA 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1268 454 Gene3D - 276 344 IPR036638 GO:0046983
Lele36g1268 454 PANTHER TRANSCRIPTION FACTOR BHLH91 1 446 IPR045895 GO:0006355|GO:0048658
Lele36g1268 454 CDD bHLH_AtMYC1_like 285 346 IPR045896 -
Lele36g1268 454 Pfam Helix-loop-helix DNA-binding domain 283 329 IPR011598 GO:0046983
Lele36g1268 454 MobiDBLite consensus disorder prediction 1 25 - -
Lele36g1268 454 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 280 329 IPR011598 GO:0046983
Lele36g1268 454 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 283 349 IPR036638 GO:0046983
Lele36g1268 454 SMART finulus 286 335 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1268 Lele-ChrLele36 15018774 15021935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1268 1 447 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 36.590 1.27e-69 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele36g1268 HLH 7.1e-11 No_clan