Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1267 ATGTGTGGAAGTGGTAGTGGCAGTGGTAAAGGCCCTAACAATCCTGGTAATAGAGGAAGAAAGATGCACCATCGCCACACTGCCTTTCAGATAACACAACTTGAAGCGTTTTTCAACGATTGCCCCCATCCTGATGAAAACCAACGACGCCAGTTAGGCAGGGAGCTGGGGCTTGATACAAGACAAATCAAGTTTTGGTTTCAGAATAAGAGATCTCAAACAAAGACTCAAAATGAGAGAGCAGATAATGCAATACTTCGAGCTGAAAATAAAAGGATGGAATGTGAGAATATAACATACAGAGAGGCACTGAAGGACATGATTTGCCCCTCTTGTGGGGGTCAAACCTTTGGGGAAGATGAACTTGACCGTCATGTCCGAGAGCTGCACCAAGAGAATCTTCGATTAAGACAAGAGTATGACAGAATATCGGACATTCTTGCCTTCTGTATTGGCAGACCAATATCAGAACCAGAATCCTCCGTGGATCCTTCCTCCTCTGCCGGATCTCCGCTGCTGGAACTGTCACCGGGGAATTCCCTGAACCCGGAAAGCATCGGAAGTCCTATTAGTCTTGACATGGACTTAGGTTCAGCTATCACAGTTTCGGATGAAAACATGTTTCCGTCAATAATGGGAGAAGTCACAGACGTTGAAAAGGATCTAATGATAGAGGCCGCTCACAACGCCATGGATGAATTACTGAAGCTTATGCATGATGATGAGCCCTTATGGGTGAAGACTTCTGTCGGTGGTCAATTTGTTCTTCATCGTGAGAGCTATGAAAAGCTATCTCCTGGGGCTCATCACTGTAGAAGTTCCTATGCTCGTAGAGAAGCTTCAAAAGATTCACGAATGATTTGGATCAATGCCATGCAATTGGCCAACATGTTCTTAGATCCGAAGAAGTGGCTGAATCTGTTCCCCACAATTGTTAGAAAAGCAGAAATACTTGAAGTGCTTGATGTTGGATCATCATCAAGCAGATCTAGAGCTTTGCAGCTGATGAGTGAAGAGATGCACATTCTGTCACCATTGGTGGCAGCTCGTGAGTTCTGTTTTATTCGATACTGTCAACAAATTGACGCAGGTGTGTGGATAATAGCTGACGTGTCATTCGATTCCTTAAGAGACAACATCCCTACCTCTCGTACTTGGAAGTTCCCTTCTGGTTGTGTCATTCAGCAGATGCCCAATGGCTTCTCCAAGGTTACCTGGATCGAACATGTAGAAGTAGATGACAGAAGCCATACACACAGGCTGTTCAGGGATCTTGTTTCTGGCAATCTCGCTTATGGAGCTGAAAGATGGGTCGTTACCCTTCAAAGAATGTGCGAACGCTTTATGTTTGCCTTGGATGAAAAGATCCCAATCGAAGAAGCTCGACAAGTGATCAGTTCTGGAGATGGAGGGAGGAGATTCATGGAGCTAACTAATCGAATGATAAAGGACTTCTGTCAAGTTCTGAACATGTCAGAGAAGGAGTTCCCTGATTTATGTGAAGCGAATAACAGTGGAATTAGGGTTTCTGTTCGGAGAAATAGAGAAGGAGGTCAGCCTGAAGGCATGGTTATTACTGCTTCAACCTCTCTCTGGCTTCCCGTTATGCACAGAACTGTTTTTGAATTCCTCAACGATGACACAAGAAGAGCTGAATGGGATGTTCTTTCCAATGGAAACACAGGGATTCATCAAATCGCACACATCTCCAATGGAACCCATCATGGCAACTGCATCAAAGTTATCCGGCCTATCATCCCCGATGAGAGCGGTGTGCTGATTCTTCAAGAAACTTGCACTGATAGCTTGGGATCTATGCTTGTGTATGCTCCGATTGACATGCCGCTGATAAATATGTGTGCGAGAGGAACAATCGACCCTGCTCTGGTGCCGATCCTTCCGTCGGGCTTTGTGATCTCCGGGGACGGTCACCGGCATCATCCCGGCCCGTTATTCGCTGGACAATCTAGCAGCTCATCTAGTTCGACTGATGGCGGCTCATCATCCTCATCAGGAGGAAGTCTTCTGACAGTGACTTACCAGATTTTGGTTTGCAGAAATGACGCAGTGAAGGAACTGAACGTTGAAACTGTGACCGCAATCAACTCGCTCCTCACCTCAACTGTTGAGAAGATTAAGGACGCTTTCAACTATGCTGGTCTCGCTTAA 2169 0.4574 MCGSGSGSGKGPNNPGNRGRKMHHRHTAFQITQLEAFFNDCPHPDENQRRQLGRELGLDTRQIKFWFQNKRSQTKTQNERADNAILRAENKRMECENITYREALKDMICPSCGGQTFGEDELDRHVRELHQENLRLRQEYDRISDILAFCIGRPISEPESSVDPSSSAGSPLLELSPGNSLNPESIGSPISLDMDLGSAITVSDENMFPSIMGEVTDVEKDLMIEAAHNAMDELLKLMHDDEPLWVKTSVGGQFVLHRESYEKLSPGAHHCRSSYARREASKDSRMIWINAMQLANMFLDPKKWLNLFPTIVRKAEILEVLDVGSSSSRSRALQLMSEEMHILSPLVAAREFCFIRYCQQIDAGVWIIADVSFDSLRDNIPTSRTWKFPSGCVIQQMPNGFSKVTWIEHVEVDDRSHTHRLFRDLVSGNLAYGAERWVVTLQRMCERFMFALDEKIPIEEARQVISSGDGGRRFMELTNRMIKDFCQVLNMSEKEFPDLCEANNSGIRVSVRRNREGGQPEGMVITASTSLWLPVMHRTVFEFLNDDTRRAEWDVLSNGNTGIHQIAHISNGTHHGNCIKVIRPIIPDESGVLILQETCTDSLGSMLVYAPIDMPLINMCARGTIDPALVPILPSGFVISGDGHRHHPGPLFAGQSSSSSSSTDGGSSSSSGGSLLTVTYQILVCRNDAVKELNVETVTAINSLLTSTVEKIKDAFNYAGLA 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1267 722 SUPERFAMILY Homeodomain-like 12 80 IPR009057 -
Lele36g1267 722 FunFam Homeobox-leucine zipper protein HDG1 8 93 - -
Lele36g1267 722 ProSiteProfiles START domain profile. 216 450 IPR002913 GO:0008289
Lele36g1267 722 Gene3D - 224 420 IPR023393 -
Lele36g1267 722 SUPERFAMILY Bet v1-like 217 447 - -
Lele36g1267 722 ProSiteProfiles 'Homeobox' domain profile. 17 77 IPR001356 GO:0003677
Lele36g1267 722 SMART HOX_1 19 81 IPR001356 GO:0003677
Lele36g1267 722 MobiDBLite consensus disorder prediction 159 187 - -
Lele36g1267 722 MobiDBLite consensus disorder prediction 157 187 - -
Lele36g1267 722 MobiDBLite consensus disorder prediction 1 24 - -
Lele36g1267 722 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Lele36g1267 722 CDD START_ArGLABRA2_like 220 446 - -
Lele36g1267 722 SMART START_1 225 447 IPR002913 GO:0008289
Lele36g1267 722 MobiDBLite consensus disorder prediction 652 672 - -
Lele36g1267 722 Gene3D - 9 94 - -
Lele36g1267 722 MobiDBLite consensus disorder prediction 649 672 - -
Lele36g1267 722 CDD homeodomain 20 78 IPR001356 GO:0003677
Lele36g1267 722 Coils Coil 71 98 - -
Lele36g1267 722 Coils Coil 119 146 - -
Lele36g1267 722 Pfam START domain 227 447 IPR002913 GO:0008289
Lele36g1267 722 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 20 717 IPR042160 -
Lele36g1267 722 SUPERFAMILY Bet v1-like 471 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1267 Lele-ChrLele36 15008121 15014977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1267 17 717 Homeobox Transcription Factor Family AT1G73360 43.441 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele36g1267 START 1.7e-34 CL0209