Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1247 ATGAGACTCTCTTCAGCTGGTTTTACTCCTTCCCCCCAAGAAGGAGAAAAGCGAGTTCTAGATTCTGAGCTTTGGCATGCTTGTGCTGGCCCTCTTGTTTCCCTGCCAGCTGTTGGAAGCCGCGTTGTCTACTTCCCCCAGGGTCACAGTGAACAGGTTGCTGCATCAACTAACAAGGAGGTGGATATCCATATTCCCAACTACCCAAGCTTACCTCCCCAACTTATTTGTCAACTTCATAATGTGACTATGCATGCTGATGCGGAGACGGATGAAGTATACGCTCAGATGACCTTGCAACCTCTGAATCCTCAAGAACAAAAGGAGGCATACCTTCCTGCAGAGTTGGGCACTTCCAGTAAACAGCCGACGAACTACTTCTGCAAAACTTTGACTGCTAGTGACACGAGCACTCATGGGGGATTCTCTGTTCCTCGTCGGGCAGCTGAGAAAGTGTTTCCTCCACTGGATTTCTCTCAGCAGCCTCCTGCTCAAGAATTGATTGCACGGGACTTGCATGGTAACGAATGGAAATTCAGACATATCTTCCGGGGCCAGCCTAAACGACATCTACTTACAACAGGATGGAGTGTCTTTGTTAGTGCTAAAAGGCTTGTTGCTGGTGATTCTGTGCTGTTTATTTGGAATGACAAGAATCAATTGCTTCTTGGTATTCGACATGCAAATCGACCCCAAACAGTGATGCCATCATCAGTGCTCTCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCTGCAGCGCATGCAGCTGCAACAAACAGTCGTTTCACCATTTTCTACAACCCACGTGCTAGCCCATCAGAATTTGTCATACCCCTAGCAAAGTATGTTAAAGCTGTGTATCATACCCGAGTTTCAGTGGGCATGCGCTTCCGGATGTTGTTTGAAACAGAGGAATCAAGTGTCCGGCGATACATGGGCACAATCACTGGCACTAGTGACCTGGATCCTGTGAGGTGGCCAAATTCGCTTTGGCGATCAGTCAAGGTTGGCTGGGATGAGTCCACAGCAGGAGATAGGCAACCTAGAGTGTCCCTGTGGGAAATTGAGCCATTAACAACATTTCCAATGTATCCTTCCCCATTCCCTCTTAGGCTTAAACGACCATGGCCTACTGGACTTCCTTCATTCCATGGTATGAAGAATGATGATTTGGGTATGAATTCTCCACTGTTCTTGGATAGAGGACTTCAGTCTCTTAATTTTCCTGGCATGGGGGTTACTCCTTGGGTGCAACCGAGGTTTGATCCCTCCTTTCTGAATTTGCAAACTGACATGTACCAAGCCATGGCCTCTGCTGCGCTTCAGGATATAAGGACTATAGATCCTTCCAGACAGCATGCAACATCCCTGCTTCAATTTCAGCAACCACAGAACTTTCCCAACAGGACTGCTGCTTCAGTGCAGGCCCAGATGATGCAGCAATCTCAAACTCAGCAAGCTTTTCAAAATAATCAAGAGAATATGCATCCATCTCAATATGAGGCTCTAAGTCAGACTCATCTTCAGCATCAAAACTCTTTTGTTAATCAGCACCACCAGCAGCATCAGCCACAACAGCAACATCAACAGCAAAGTTTTTCTGATCAGCAGATTTCAAGTACTGTCTCTACCATGTCTCAGTTTGTTTCAGCAGCTCAACCTCTGTCAACACCAACGCAAGCTATTTCTTCGTTGTGCCATCAGCAAAGCTTTTCTGATTCAAATGGGAACAGTGTAACTACTGCTGCAATGGTTTCTCCCCTGCATAGTATTTTGGGTCCATTTCCCCAAGAAGAAACTTCCCACCTTCTCAATATTCCTAGGACAAGCTCTTGGATATCTGTTCAACCTTCTACTGCTACTGCTACTTGGCCTTCCAAGCGAGTTGCCTTGGACCCTCTTCTTTCTTCTGGAGCTTCTCAATGTGATCTGCCTCACATGGATCAGTTAGGGCAGCGCCAGAATACATTGTCCCAAAATGCAGTTACTTTGCCACCCTTTCCCGGAAGGGAGTGCTCCATTGATCAAGAAGGGAGCACTGATCCACAAAACCATCTTTTATTCGGCGTTAATATAGAGCCCTCATCTCTTCTAGTGCAGAACGGGATGTCAGGCCTTAAGGGGGTTAGCAGCAATGTTGATTCCACAACCATACCTTTTCAGTCTTCTAATTACCTGAATACTACAGGCACTGAATCTACGTTGAATCCTGCAATGTCACAAACCATTGGTGAATCAGGATTCCTGCAGGCCCCAGAAAATATGGGCCAAGGAAATTCTCCTAATAAAACCTTTGTAAAGGTTTACAAGTCAGGGTCCTTCGGAAGATCTTTGGATATTACTAAATTCAGCAGCTACCATGAGCTGCGGCGTGAACTTGCTTGTATGTTTGGCCTTGAAGGCGAGTTGGAGGACCCTGTAAGATCAGGCTGGCAGCTTGTATTCGTTGACCGAGAGAATGATGTTCTTCTCCTTGGTGATGGCCCTTGGCCGGAATTCGTCAACAGTGTATGGTGTATCAAGATACTTTCCCCACAAGAAGTGCAACAAATGGGCAATAATGGCCTCGAGCTTCTGAATTCGGTTCCGATTCAAAGACTTTCCAACGGCACATGTGAAGACTTTGTGAGCCGACAGGACCCGAGAAGTTTAAGCTCTGGGATCACAACTGTGGGGTCTCTAGACTACTAA 2694 0.4659 MRLSSAGFTPSPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDIHIPNYPSLPPQLICQLHNVTMHADAETDEVYAQMTLQPLNPQEQKEAYLPAELGTSSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRHANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGTSDLDPVRWPNSLWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPTGLPSFHGMKNDDLGMNSPLFLDRGLQSLNFPGMGVTPWVQPRFDPSFLNLQTDMYQAMASAALQDIRTIDPSRQHATSLLQFQQPQNFPNRTAASVQAQMMQQSQTQQAFQNNQENMHPSQYEALSQTHLQHQNSFVNQHHQQHQPQQQHQQQSFSDQQISSTVSTMSQFVSAAQPLSTPTQAISSLCHQQSFSDSNGNSVTTAAMVSPLHSILGPFPQEETSHLLNIPRTSSWISVQPSTATATWPSKRVALDPLLSSGASQCDLPHMDQLGQRQNTLSQNAVTLPPFPGRECSIDQEGSTDPQNHLLFGVNIEPSSLLVQNGMSGLKGVSSNVDSTTIPFQSSNYLNTTGTESTLNPAMSQTIGESGFLQAPENMGQGNSPNKTFVKVYKSGSFGRSLDITKFSSYHELRRELACMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNNGLELLNSVPIQRLSNGTCEDFVSRQDPRSLSSGITTVGSLDY 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1247 897 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele36g1247 897 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 853 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele36g1247 897 MobiDBLite consensus disorder prediction 515 539 - -
Lele36g1247 897 SUPERFAMILY CAD & PB1 domains 756 839 - -
Lele36g1247 897 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Lele36g1247 897 Pfam AUX/IAA family 753 849 IPR033389 -
Lele36g1247 897 Gene3D - 760 853 - -
Lele36g1247 897 FunFam Auxin response factor 759 853 - -
Lele36g1247 897 CDD B3_DNA 126 219 IPR003340 GO:0003677
Lele36g1247 897 Gene3D - 125 228 IPR015300 -
Lele36g1247 897 FunFam Auxin response factor 125 229 - -
Lele36g1247 897 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Lele36g1247 897 FunFam Auxin response factor 291 363 - -
Lele36g1247 897 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Lele36g1247 897 ProSiteProfiles PB1 domain profile. 764 848 IPR000270 GO:0005515
Lele36g1247 897 SMART B3_2 127 229 IPR003340 GO:0003677
Lele36g1247 897 Gene3D - 291 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1247 Lele-ChrLele36 14853728 14858630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1247 1 897 B3 DNA Binding Superfamily AT1G30330 68.987 0.0 1206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele36g1247 AUX_IAA 9.6e-07 CL0072