Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele36g1232 ATGGAGGAGGATGGGATTCAAGCAAAAGCGTGTAAATTCCCGAGAATGGAAAATGGAAGTGCCAGAAACGATTCCTCCAACAACCACAAGCTAGGTTCCATCAATACTATCAACGAAGAAAATGGAGAGCTCAGAAAAAGAAGTGGTGGCGGAGGACGAGGAGGAGGAGGAGGCAGCGATGGAATCAGCAACCGGTTTCACAGTTGGCACCACCAGTCTTCTCGGATTATTAGGGTTTCTCGTGCTTCCGGTGGGAAAGATCGGCACAGCAAGGTCATGACTTCCAAGGGTTTAAGAGACAGAAGGGTTCGTCTCTCTGTGACCACAGCGATTCAATTCTATGACCTTCAAGATCGTCTGGGTTATGACCAACCGAGTAAAGCTGTGGAATGGTTAATCAAAGCAGCTTCGGATGCAATTTCTGAGCTTCCTTCTCTGAACAACACTTTCCCTGAGACCCCTAAGCAACCCAGTGATGAGAGGAGAGTTGACGAGAAATGTATCGATTCAGCTGATGCAGAAGGAGATGGTGAAGCGAGTTTCCACCCGCAGAATCAGAATCAAAGTCAGAATCTTTCCTTGTCCAAATCTGCTTGCAGTAGTACATCTGAGACGAGCAAAGGCTCCGGCGGCTTGTCGCTTTCGAGGTCGGCCATTCGCGACAAGGCCCGCGAGAGGGCGAGGGAGAGAGCTGCGAAGGAGAAGGAGAAAGAGAATGATGAATCTTGCAATAATATTGCTCATCATCCTCAGAATAATAATAACAATGTGATCTCCATGGCTCAAACTTCTTTCACTGAGCTTCTCACTGGTGGGATAAACGCCAGCGTTGCTGCCACAAATAGTCCAATCGGGTCGGGTCAACAGAATCATCATCGGAGTGATGAGGTTGATCTGTTCAACAAAGGAGCTACACATCAATGGAGTATAGCGCCTATGAACTACGTCTGCGCGGGGCTTCTGGGAGGTTCGTCGTCTTTAAGAACCCCGCATCATCATCATCATCATCAATCTTCTGGGTTTTCAGGGCAGATACAATTGGGGAACAATCTTCCTCAGGCAATGTCGATTGCACCATTCGGAGTACAAAGTGAAAGCCACTCAGATCAGCTTCAGCATTTCTCGTTCATTCCCGACCATCTTATGCCGACGCAGCAAGCCCCTAGCGGCGGAGGGAGCGAGTATAATCTCAACTTCACCATCTCTTCTTCTAATAATTCCGGCGGCTTTGCTGGTTTCAATAGTAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTTCTGCCTCATCATCTGCAGAGGTTCTCACCTTTAGACGGATCGTCCAACTTACCTTTCTTCATCGGAGCCCCCGCAGCTCCGGCCATGGAGAATCACCAACACCACCAACACCAGTTCTCGCCTGAATTAGACGGCCGCCTGCAGCTCTTCTACGGCGACGGAAGCCGGCATTCAGACCAGAAGGGGAAGGGGAAGAACTGA 1479 0.4956 MEEDGIQAKACKFPRMENGSARNDSSNNHKLGSINTINEENGELRKRSGGGGRGGGGGSDGISNRFHSWHHQSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAASDAISELPSLNNTFPETPKQPSDERRVDEKCIDSADAEGDGEASFHPQNQNQSQNLSLSKSACSSTSETSKGSGGLSLSRSAIRDKARERARERAAKEKEKENDESCNNIAHHPQNNNNNVISMAQTSFTELLTGGINASVAATNSPIGSGQQNHHRSDEVDLFNKGATHQWSIAPMNYVCAGLLGGSSSLRTPHHHHHHQSSGFSGQIQLGNNLPQAMSIAPFGVQSESHSDQLQHFSFIPDHLMPTQQAPSGGGSEYNLNFTISSSNNSGGFAGFNSRGTLQSNSPSLLPHHLQRFSPLDGSSNLPFFIGAPAAPAMENHQHHQHQFSPELDGRLQLFYGDGSRHSDQKGKGKN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele36g1232 492 MobiDBLite consensus disorder prediction 180 213 - -
Lele36g1232 492 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 402 IPR005333 GO:0003700
Lele36g1232 492 Pfam TCP family transcription factor 84 237 IPR017887 -
Lele36g1232 492 MobiDBLite consensus disorder prediction 155 176 - -
Lele36g1232 492 Coils Coil 219 239 - -
Lele36g1232 492 MobiDBLite consensus disorder prediction 19 39 - -
Lele36g1232 492 MobiDBLite consensus disorder prediction 144 254 - -
Lele36g1232 492 ProSiteProfiles TCP domain profile. 85 143 IPR017887 -
Lele36g1232 492 ProSiteProfiles R domain profile. 217 235 IPR017888 -
Lele36g1232 492 MobiDBLite consensus disorder prediction 218 244 - -
Lele36g1232 492 MobiDBLite consensus disorder prediction 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele36g1232 Lele-ChrLele36 14722225 14723703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele36g1232 62 492 TCP Transcription Factor Family AT4G18390 44.934 3.11e-85 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele36g1232 TCP 4.6e-41 No_clan